Alteromonas mediterranea DE1: amad1_01005
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Entry
amad1_01005 CDS
T02340
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00300
Lysine biosynthesis
amaa00470
D-Amino acid metabolism
amaa01100
Metabolic pathways
amaa01110
Biosynthesis of secondary metabolites
amaa01120
Microbial metabolism in diverse environments
amaa01230
Biosynthesis of amino acids
Module
amaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
amad1_01005
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
amad1_01005
Enzymes [BR:
amaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
amad1_01005
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AFV83733
LinkDB
All DBs
Position
complement(225538..226788)
Genome browser
AA seq
416 aa
AA seq
DB search
MDYFAYSQGQLHAEEVAVSDIAAQHGTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVK
ANSNIGVLSVLAKLGSGFDIVSAGELARVIEAGGDASKVVFSGVGKKHDEIRYALEQGIM
CFNVESEPELHRINEVAGEVGVKAPISLRINPDVDAKTHPYISTGLKANKFGIARERALA
TYELAASLPNLNVVGMDCHIGSQLTEIGPFVDALERLLVLIDELAERNIIIEHLDVGGGL
GVTYNDEEPPHPKAYAQAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEGEEKS
FAIVDAAMNDLLRPALYSAWQKIIPVKEESTAKLHTYDVVGPVCETGDFIGKDRELAIEP
TDLLAVRSAGAYGFVMASNYNSRCRPAEIMVDGDKAIVVREREKQKDLWQGEHKLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtggattatttcgcctacagccaaggtcagcttcacgctgaagaggtcgctgtttctgat
attgcagctcagcacggaacgccggtttatatttattcaagagccacgttagaacgtcat
tggcacgcttttaacgatgccattggtgagcaccctcacctggtttgttatgccgttaaa
gctaattctaatattggcgtattaagtgtattagcgaagctgggttcaggttttgatatt
gtttcagccggtgaactcgcccgcgttatagaagccggtggcgacgctagcaaagtggtt
ttttctggcgtaggcaaaaagcacgacgaaattcgctatgcgttagagcaaggcattatg
tgctttaacgtagagtcagagcctgaattacaccgcattaatgaagtggccggtgaagta
ggcgtaaaagcccctatttctttgcgtattaacccagatgtagatgctaagacacaccct
tacatctcaactggcttaaaggccaataaatttggaatagcgcgcgagcgcgcactggcg
acttatgaactagcggcatcgcttccaaatttgaatgtagtgggaatggattgccacatt
ggctctcagttaactgaaataggtcccttcgtagatgcgttagagcgtttgcttgtgctt
attgatgagcttgctgagcgcaacatcatcatcgaacatttagatgtgggcggcggcctg
ggcgtgacttataacgatgaagagccaccccaccctaaagcctatgcacaagccatggct
gaaaaaatggtcggcagagagaacctcaaacttatccttgagccgggccgcgctattgcc
gccaacgctggtattttagtcaccgaggtcgagttcatcaaagaaggcgaagagaaaagc
tttgctattgtcgatgcggcaatgaacgatctgctgcgtccagcgctttactcagcgtgg
caaaagattatcccggtaaaagaagaaagcaccgcaaaactacacacctacgatgtggta
ggcccagtgtgcgaaaccggtgactttataggcaaagaccgtgaattagccattgagccc
accgatttacttgcagttcgcagtgccggtgcctatggttttgttatggcgtcgaactac
aacagccgctgccgcccagcggagattatggtagatggtgacaaagccattgtggttcgc
gaaagagaaaaacaaaaagatctctggcaaggtgagcataaacttccgtaa
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