Alteromonas mediterranea DE1: amad1_02940
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Entry
amad1_02940 CDS
T02340
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00071
Fatty acid degradation
amaa00280
Valine, leucine and isoleucine degradation
amaa00310
Lysine degradation
amaa00362
Benzoate degradation
amaa00380
Tryptophan metabolism
amaa00410
beta-Alanine metabolism
amaa00640
Propanoate metabolism
amaa00650
Butanoate metabolism
amaa00907
Pinene, camphor and geraniol degradation
amaa00930
Caprolactam degradation
amaa01100
Metabolic pathways
amaa01110
Biosynthesis of secondary metabolites
amaa01120
Microbial metabolism in diverse environments
amaa01200
Carbon metabolism
amaa01212
Fatty acid metabolism
Module
amaa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
amad1_02940 (fadB)
00650 Butanoate metabolism
amad1_02940 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
amad1_02940 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
amad1_02940 (fadB)
00310 Lysine degradation
amad1_02940 (fadB)
00380 Tryptophan metabolism
amad1_02940 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
amad1_02940 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
amad1_02940 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
amad1_02940 (fadB)
00930 Caprolactam degradation
amad1_02940 (fadB)
Enzymes [BR:
amaa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
amad1_02940 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
amad1_02940 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
amad1_02940 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
amad1_02940 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
5_3_exonuc_N
Motif
Other DBs
NCBI-ProteinID:
AFV84116
LinkDB
All DBs
Position
complement(643528..645678)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYTGKSLSVSLLDDGFAELVFDAEGSVNKFDRQTVSELDEATQALLAKGDVKGLVVRSA
KPAFIVGADITEFTGLFAMDDAEVLQWVANTSQVFDRFEDLPFPTIAAVNGFALGGGCEM
ALACDMRIADTTASIGLPEVKLGLMPGFGGTVRLPRLIGADNALEWMTTGRDRKGAKALA
EGAVDAVVAPEALVEGALSMVKDAADGKFDWQARRAVKKAPLQLNKNEAMMSFSTAQAMV
FAQAGKHYPAPHKMVETVQKAAGLDRDGALKLENEGFVALAKTDAAKAQIGIFLADQLVK
SKGKKQAKAATKQSKLNAVLGAGIMGGGIAYQSAVKGTPVIMKDINQGALDLGLLEAAKI
LGKGMKRGKVDATKMAQTLNAITPTLEYSTLKDADLVIEAVVENPKVKGIVLKEVEDNVA
DDAIITSNTSTISINQLAKSLDKPERFCGMHFFNPVHRMPLVEIIRGEKTSEETINAVVA
ATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVDKVMEKIFGWPMGPAY
LMDVVGIDTGDHAADVMAAGIPERMARLDNDPVTLFYKEERLGQKNGKGFYNYGVDKRGK
PKKTPAEEAYALMAPHVAEKTDFEADDIIARLMIPMANEAIRCLEEGIVDSAAEADMALL
YGLGFPPFRGGIFRWIETIGLANFVAMADKYAELGPIYQISDGVREMAASGKSYFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatatacacaggcaaaagtctttccgtcagcctgttagatgacggctttgctgagctg
gtattcgacgccgaaggttcagtaaacaagttcgaccgccaaacagtgagcgaacttgac
gaagcaacccaagccctacttgctaaaggcgatgtaaaaggcttagtagtacgcagtgca
aaacctgcatttatcgtaggtgcagatatcaccgagttcactggtcttttcgctatggac
gatgctgaagtactacagtgggttgccaatacgtcacaagtattcgaccgcttcgaagac
ctacctttccctaccattgctgctgttaatggctttgcgctaggtggtggttgtgagatg
gcattggcgtgtgacatgcgtattgcagacacaacagcttcaatcggtttaccagaagtt
aagctaggccttatgcctggttttggtggcacggttcgccttcctcgcttaataggtgca
gataacgcccttgagtggatgaccactggccgcgacagaaaaggcgcgaaagcccttgct
gaaggtgcagttgatgcggttgtagcaccagaggcgctagttgaaggtgcgctttcaatg
gtgaaagacgccgctgacggtaaatttgattggcaagcacgtcgtgcagttaagaaagcc
ccgctacagctaaacaaaaacgaagctatgatgagcttcagtactgctcaagccatggta
ttcgcgcaagctggtaagcattacccagctccgcacaaaatggttgagacggtacaaaaa
gcagcgggcctagaccgtgacggtgcacttaagcttgaaaacgaaggctttgtggccctt
gcgaaaaccgacgcagcgaaagcacaaatcggcattttccttgccgaccagctagttaag
agcaaaggcaagaagcaagcaaaagcagccactaagcagtctaagcttaacgctgttcta
ggtgcaggcatcatgggcggcggtattgcataccaaagcgcagtgaaaggcacaccggta
attatgaaagacattaatcaaggtgcactagaccttggtcttttagaagcggccaaaatt
cttggtaaaggtatgaagcgcggtaaagttgatgcgactaaaatggcgcaaacgcttaac
gcaattacacctacccttgagtacagcacgcttaaagatgcagaccttgttattgaagcg
gttgtagaaaacccgaaagtaaaaggtattgtacttaaagaagtagaagacaatgtagcg
gacgacgctatcatcacttcaaacacttctactatctctatcaatcagctagctaaaagc
ttagacaagccagagcgcttctgtggtatgcacttcttcaacccagtgcaccgcatgccg
cttgttgaaattattcgtggcgaaaaaacgtcagaagaaaccatcaatgcagtagtagcc
gctacccttaaaatgggcaaaacccctattgtggttaatgactgcccagggttcttggta
aaccgcgtattgttcccatactttgcgggcttcagtaagctacttatcgacggcgctgac
tttgttgctgttgataaagtaatggaaaaaatcttcggctggccaatgggcccggcttac
ctaatggacgttgtaggtatcgacacaggcgatcatgcagcagacgtaatggcagcaggt
attccagagcgtatggctcgcctagacaacgacccagtaaccctgttctacaaagaagag
cgtttaggtcagaaaaacggtaaaggtttctacaactacggtgttgataagcgcggtaag
cctaagaaaacacctgctgaagaagcatatgcactaatggcgccccacgtagctgagaag
acagactttgaagctgacgacattattgcacgccttatgatccctatggcaaacgaagca
attcgctgcctagaagaaggcattgtagatagcgcagctgaagcagacatggcgctactt
tacggcttaggtttccctccattccgcggtggtattttccgttggattgaaaccattggc
ttggcgaactttgttgcgatggcagacaagtacgctgaacttggtccaatttatcagatt
tcagatggcgttcgtgaaatggccgcttctggtaaatcctatttcgcataa
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