Alteromonas mediterranea DE1: amad1_03250
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Entry
amad1_03250 CDS
T02340
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_03250
Transporters [BR:
amaa02000
]
Other transporters
Pores ion channels [TC:
1
]
amad1_03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CarbopepD_reg_2
CooC_C
Big_1
OMP_b-brl_3
Dioxygenase_C
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
AFV84178
LinkDB
All DBs
Position
714749..717208
Genome browser
AA seq
819 aa
AA seq
DB search
MKMRSLLSLSIAGLLSAPVYATTVTGKVTDTAGQPVAGAEVKIEGSRRVAFTDENGVYRF
DDVKQPHIHLHVYSSNFIHGDNDLGDVDTDQNVDFVLKPASVENIVVTANALQSSVLESV
TPVTVIGAEKLRKIEAPTLGETLKNAPGVHSTYFGPVSSSPVIRGNDGPRVKIVQNGLDV
SDVSRVGPDHNVATSLASATQVEVLRGPATLQYGSGAIGGVVNVVDKRIPQYQLDGVEGE
AETSYSTVNNGSYTRADVTGGSGNIVWHVDGFYRDTDNADIPGFASIDPSEDEPNGELES
SAMETRNVVAGLSYVAEEGYFGFAVEQLDNEYGVPGHGHEDEHDEHDEEHDELDGNHEDE
EHEGGEGVLLDVDMTRYQAAGEWHSPIQGLTNLKFAAAYTDYQHAEIEDGEPGTVFTNES
SDIRLSAYHEEVNGWHGVFGVQFNHSDYNAVGEEAFTPGNTTSSYALYVIEQKNVGDVTF
ELGGRLERTTLDADASEIELEVLQEAHEGEEHDEDHEGEEHEEHAVAFTFPDYDFTSVSV
SAGANWEYQEGHSIAVTLSRSERAPSQQELFSAGQHLATQSYEVGLVFDMDDEGHIEETL
KGVKEEVSTNLDLTFRKFTGDWGYSVSFFYNQADDYIYQTSTGLIALTEHEEHDEDEAVE
EEHDEHGDEEGLPVYYFQQADADIWGFEAETYVDFSDSLRLTVFGDYIRTEVEDDNLPRT
PPMRFGSELSYVNDGLSADVGFTWYDEQNNVASFETTTDGYTLVNASVQYEFATQNIDWV
VFARGDNLTDEEARVHTSFLKDQAPLPGRNFTMGVRALF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcgttcgctgctaagtttgtccatagcagggctattaagtgcgcctgtgtat
gccacaacagttaccggaaaggttaccgataccgcaggtcagcccgttgctggcgccgaa
gtaaaaatagaaggtagccgccgcgtggctttcacagatgaaaatggtgtttatcgcttc
gacgatgtgaagcagcctcatattcatttacacgtctattcttctaacttcatacacggt
gataacgacttaggtgatgtagacaccgatcaaaacgtcgacttcgtattaaagccagca
tcggtcgaaaacattgttgttaccgctaatgcattacagtcttcagtgcttgaatcagtg
acccctgttaccgtcattggcgctgaaaagctacgcaaaatagaagcgcctacccttggt
gaaactctaaaaaatgcgccgggtgttcacagtacctattttggcccggtttcgagtagc
ccggtgatccgcggtaacgatggcccgcgcgtcaagattgttcaaaacggactcgatgtg
tctgacgtatcccgcgtcggccccgatcataacgtagcaacatctcttgccagtgctacg
caagtagaggtgcttcgcgggccggctacgttacagtacggaagcggcgccattgggggc
gtggtaaacgtagtcgacaagcgcattcctcagtatcaattagacggtgttgaaggggaa
gctgaaaccagctacagcacggtcaataacggttcgtacacccgtgctgacgtgacgggg
ggcagcggcaacattgtatggcatgttgatggtttttatcgcgatacagataatgccgat
attccaggctttgcctctatcgacccaagcgaagatgaaccaaacggtgaacttgaaagc
agtgccatggaaacccgcaatgttgttgccggtttatcttacgtggctgaagaaggttac
tttggctttgccgtagaacagcttgataatgagtacggcgtgcctggtcatgggcacgaa
gacgaacatgacgaacacgatgaagagcatgacgagcttgatggcaatcatgaagatgaa
gagcatgaaggcggagaaggcgtgctacttgatgtagacatgacccgttatcaagctgca
ggtgaatggcattcacctatccaaggtttaactaaccttaaatttgccgctgcctacaca
gattatcagcatgctgaaatagaagacggtgagccaggtactgtatttacgaatgagtcg
agtgatattcgcttgtctgcttatcacgaagaggttaacggctggcacggtgtatttggt
gtgcagtttaaccacagtgattataacgctgtaggcgaagaagcgtttacgccgggtaat
acaacatcaagctatgcactctatgtgattgagcagaaaaatgtgggtgatgtaaccttc
gagctaggcggccgtttagagcgcacaacgctagacgctgatgccagtgaaattgagttg
gaagtgcttcaagaagcgcatgaaggggaagagcacgacgaagatcacgagggcgaagaa
catgaggagcatgctgtagcctttaccttcccagattacgactttaccagcgtgtcggtt
tccgcaggggccaactgggaatatcaagaaggtcactcaattgcagttacgctttcacgc
agcgaacgcgccccaagtcagcaagagcttttctctgctggtcagcatttggctacccaa
agctatgaagtgggtttagtcttcgatatggacgatgaagggcatattgaagaaaccctc
aaaggcgtaaaggaagaagtgagtacgaatctagatctaaccttccgcaagtttacgggc
gattggggttacagcgtgtcgttcttctacaatcaagcagacgactacatttatcaaacc
agtacagggctaatcgcgctaaccgagcatgaagagcacgacgaagatgaagctgtagaa
gaagagcatgatgagcacggcgatgaagaaggtttgccggtctattacttccaacaggct
gatgctgacatctggggttttgaagcagaaacctatgtagactttagcgattcgttgcgc
cttaccgtgttcggtgattacattcgcacagaagtggaagacgataaccttccgcgtaca
ccacctatgcgttttggtagtgaattaagctacgtaaacgacgggttaagcgccgatgta
ggtttcacatggtatgacgagcaaaataacgttgcgtcgtttgaaacgaccaccgacggc
tacaccttagtaaacgctagcgtgcaatacgaatttgctacacaaaacatagactgggta
gtattcgcccgtggtgataacctaaccgatgaggaagcgcgagtgcatacgtctttctta
aaagaccaggcaccgcttccgggtagaaactttactatgggtgtgagagcgttgttttaa
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