Alteromonas mediterranea DE1: amad1_03620
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Entry
amad1_03620 CDS
T02340
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00061
Fatty acid biosynthesis
amaa00071
Fatty acid degradation
amaa01100
Metabolic pathways
amaa01212
Fatty acid metabolism
amaa02024
Quorum sensing
amaa04146
Peroxisome
Module
amaa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
amad1_03620
00071 Fatty acid degradation
amad1_03620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
amad1_03620
09145 Cellular community - prokaryotes
02024 Quorum sensing
amad1_03620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amaa01004
]
amad1_03620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amaa04147
]
amad1_03620
Enzymes [BR:
amaa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
amad1_03620
Lipid biosynthesis proteins [BR:
amaa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
amad1_03620
Exosome [BR:
amaa04147
]
Exosomal proteins
Exosomal proteins of breast milk
amad1_03620
Exosomal proteins of breast cancer cells
amad1_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFV84250
LinkDB
All DBs
Position
complement(807518..809086)
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AA seq
522 aa
AA seq
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MITYPDNVTCLADYIESVMQRFADRPAYTALGQTLTFAEIDSKSSALARYFVHEAKLTPG
TRVAIQLPNLIQNPIVVYAALRAGLVVVNTNPLYTEREMKHQFTDSGAKALVILGDLLPK
FTSIKNDTSINTVITTSATELLDPNTAPALDGTVSLSQAVEIGKGLPQFERPKIQLDDLA
MLQYTGGTTGVSKGAALSNKNILANCIQMLDRIGDGFKGGEEVLVCPLPLYHIYAFTVGM
MALFAKGTQIILIPNPRDIDGFIQTLKPHKISAFMGINTLFVGLGRHPEFAKLDFSNLHL
TMSGGTALTQAAVSIWQDVTGNTITEGYGLSETAPVVSFNIPGKEEIGTVGHELEGTEVA
LLDSQDKPVEEGDSGQIAVRGPQVMMGYWNRDDETAKVMTEDGFFKTGDIGIRTESGAIK
IVDRLKDMIIVSGFNVYPNEIEDVLTSHPNVMEAAVVGKPDDKTGERVCAYITLSSDVST
DDVTEFCKKHLTNYKIPKSITVLEELPKSTVGKILRRELRSA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgataacttaccctgataatgtgacctgtcttgccgactacattgaaagcgtaatgcag
cgatttgctgacaggcccgcgtatacggcccttgggcaaacccttacctttgctgaaatt
gatagcaagtcatcagccttagcgcgctactttgttcacgaagctaagcttacccctgga
accagagttgctattcaacttcctaatttaattcaaaaccccattgtcgtttatgctgca
ttacgcgcaggtttagtggtagtgaataccaacccgctctacacagagcgcgaaatgaag
catcaatttactgacagcggcgcaaaagccttagtcatacttggcgatttacttcctaaa
tttactagtattaaaaatgatacgagtatcaatacggttattaccacatcagcaacagag
ctcttagaccccaatacggcccccgcattagatggcacagtatcccttagccaagcggta
gaaattggcaaaggtcttccgcaattcgaacgccctaagattcagttagatgatcttgcc
atgctgcagtacacaggcggtaccacaggggtatcgaaaggggcagcgttaagtaacaaa
aacatacttgctaactgtattcaaatgcttgaccgtattggcgatggctttaaaggcggt
gaagaagtgttggtgtgcccattaccgctataccatatctatgcctttaccgtaggaatg
atggcgcttttcgccaaaggaacacaaattatcctgattccaaaccctcgcgatattgac
ggctttatacaaaccttaaaacctcataaaatatccgccttcatgggtattaatacgtta
tttgttggccttggtcgtcacccggaatttgccaaattagacttttctaatttacatctc
accatgtcaggcggtacggctcttacacaagctgcggtatctatttggcaagatgtgacg
ggtaacaccattactgaaggctacggcttatcggaaacagcccctgttgtgtcatttaat
attccaggcaaagaagaaattggcaccgtaggccacgaacttgaaggcacggaagtcgcg
ttgttagacagccaagataaaccagttgaagaaggcgactctgggcagatagcggtgcgc
gggccacaagtaatgatgggatattggaaccgtgatgacgagacggcaaaagtcatgacc
gaagatggcttttttaaaaccggagacatcggcatacgcacagaatctggtgctataaaa
atagtagatcgccttaaagacatgatcattgtgtctggctttaacgtgtacccgaacgaa
atagaagacgtattaacctctcaccccaatgtgatggaagctgcagtggtaggaaagccc
gacgataaaactggcgaaagggtatgcgcctacattacgttatccagtgatgtatccacc
gatgatgtaaccgaattctgcaaaaagcacttaaccaactacaaaatcccaaaatctatc
actgtattagaagaacttcccaaatccacagtgggtaaaattttacgtcgagaattacgt
tcagcgtaa
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