Alteromonas mediterranea DE1: amad1_04405
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Entry
amad1_04405 CDS
T02340
Name
(GenBank) transposase
Organism
amaa
Alteromonas mediterranea DE1
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_Crp_2
Sigma70_r4
DUF4167
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AFV84405
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Position
980778..982295
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AA seq
505 aa
AA seq
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MRKIKDVLRLKFEVGLSHRDIGQCLSLGPSTVSEILSRFKSSDLSWPLPEALNDKTLEAQ
LYNTGPVQRQKRLPDFMLMQQELKRKGMTKLLLWEEYCAEDSASAYGYTQFCEHYQRWLK
KQKRSMRQHHIAGDKLFIDYCGPTVPIVNPDTGEVRYHAQIFVATLGATNYTYVEAGRSQ
REEDWIMAHVRTFRYLGGVPRLLVPDNLKSAVTKAHRYAPTLNENYAKMARHYGCAIVPA
RPYKPKDKAKAENAVLIVERWILMRLRRECFYTLAGLNARIKVLMEELNNRPQRLHPGSR
REQFELLDKPALMPLPGTTYEYIDSKRAKVGPDYHVLYQKHAYSVPHTLVGNTVTIEASG
SVVSIYHQNQLVTQHAKSAKDGGFSTQKEHMPDSHVKQRFSAERLLHWAENIGVGTRGVV
QWHIHSRQHPEQAIKSCLAILNLTKQHGAARLEAACQKALLLERPHRSVVMNLLKHHQES
VPSTAVEHDEQPVTHHNIRGQHYYQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagattaaagacgtcctgcgtctcaaattcgaagtaggattaagccatcgagac
atcggccaatgcttaagtctcggcccttcaaccgtgagtgaaatactctcgcgctttaaa
tccagtgatttatcgtggccgttgccggaagcgctcaatgataaaacgctcgaggctcag
ttgtataacactggtcccgttcagcgccaaaaacggctgcctgactttatgcttatgcag
caagagttgaagcgtaaaggcatgactaagctgttgctgtgggaagagtattgcgccgaa
gatagtgcgtcagcctacggttatacgcagttctgcgagcattatcagcggtggcttaaa
aagcagaagcgtagtatgcgtcagcatcatatcgcgggtgataagttgtttattgactat
tgtgggccgacagtacctatcgttaatcccgatacaggcgaagtgcgttatcatgcacaa
atctttgttgcgactttaggcgcgaccaactacacgtatgttgaagctggccgctctcag
cgtgaagaagattggataatggcgcacgtaagaacgttccgctaccttggcggtgtaccc
cgtttacttgtgccggataacctgaaatcagccgttaccaaagcccatcgttacgcgccc
acgctgaatgaaaactacgcaaaaatggcgcggcattacggctgcgccattgtgcctgca
cggccttataaaccgaaggataaggctaaagcagaaaatgcggtactgattgttgaacgc
tggatactaatgcgattgcgacgggagtgcttttacactttagcgggccttaacgcacgt
atcaaagtgttaatggaagagttaaataatcggccgcagcgcttacatccaggctctcgc
cgagagcagtttgaactgctcgataaacccgcgttaatgccattgcctggcaccacgtat
gagtacatcgacagtaaacgagcaaaggtggggccggattaccatgtgctgtaccaaaag
cacgcttactctgtaccgcacaccttagtaggcaacacggtgaccatcgaggcaagtggc
agtgtggtcagcatctatcaccaaaatcaactggtgacacagcacgctaaatcagcaaaa
gacggcggcttctcaacgcaaaaagaacacatgccggacagccatgtaaaacagcgcttc
agcgctgaacgcttattgcactgggcggagaatattggtgtaggtacgcgcggtgtggtg
cagtggcacatccatagccgtcaacatccagagcaagcgattaaaagctgcctagccatt
ctaaatctcactaaacagcatggtgctgcgcgacttgaagccgcttgccaaaaggcgtta
ctgctagaacgccctcacagaagcgttgtgatgaacttactcaaacatcaccaagaaagc
gtaccgagcaccgctgtcgaacacgatgagcaacctgtaacccaccacaatatccgcggc
caacattactatcaatag
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