KEGG   Alteromonas mediterranea DE1: amad1_04445
Entry
amad1_04445       CDS       T02340                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
amaa  Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amaa02048]
    amad1_04445
Enzymes [BR:amaa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     amad1_04445
Prokaryotic defense system [BR:amaa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   amad1_04445
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AFV84413
LinkDB
Position
990533..993583
AA seq 1016 aa
MFNEHTVTENGIIDRLKGLSGVKWTYCHGESLPKKAQDIFVDEWLKDALCSLNPDIAKQP
DYADEVIHKLRGLMLEARNTGLAKANENFQEWLMAEKSLPFGENGDHITINLIDIDNIKN
NHFVVSQQVHYIAATEVYFDIVLYVNGIPLVVGEVKTATRPSVTWQDGAADFMGGKKHYW
KNVEPFFVPNLLCFASEGKTFAYGAINARVKDWGPWHNTDQREEILPGMASVLQSVEGLL
NPKTLLQLLESFALFSTIKTGKHTPPKRIKILPRYPQFEAAKQIVDRVRNGYPKKGLIWH
FQGSGKSLLMLYAAKMLRADNELNNPTVLVVVDRRDLDSQINETFGGADVKNLIKVQSCK
KLGEHIEQDSRGILITTIFKFKDVVIDDSNPNGLNNRDNIIVLVDEAHRTQEGGLGEKMR
WALPKAHFYGLTGTPISGIDRNTFKLFGAEEDPGRYMNRYSYKQSIRDGATNPVKFEPRL
AELRVDRDAINQEFEQLAKDNNLDDEEKAALSKRAGKLAVMLKASKRMAAVSNDIVEHFY
SHVKPKKMKGMVVVYDRDACVQMYYLLGEKLGFDAVEVVMNVDQAPIIDDKGKKNKDWAK
WESDKDIPVKEDDFKRWQIIDAEEQTQKDLIEGYKDPQNPLQLIIVTAKLLTGFDAPICY
CMYLDKPLRDHTLLQAMCRTNRLYETDETRKNIGLIIDYLGVFENLRTALAYNPDEIEGV
VEGIEAFKALLPTQLEKCLSFFPGVDRTLEGFEGVMAAQDCLPSNEKRDEFAASFGVLTK
LWSAINPDPFLNPYRQDYKWLAQIYESVRPVSQTGALVWAALGPETIKIIHENTDIKRIR
DDIDELIMDEHAIFTLTEKEQEQRAKRLEIDLMGRLRGSGEPKFVELGERLEKLRQDYEA
GVIKAIDWLKALLDTAKDTVQAERETGEKVVTEEDNVQALTKLFMETRPNSTPQVIQDVV
EQIDKIVKAKRFDGWQNSNSGPREIQKALLVTLAQFGLGKDKELFNKAYGYIEEYY
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgtttaacgaacacaccgtcacagaaaatggaattattgaccgcttaaagggtttaagc
ggggtaaagtggacttactgccacggtgagagcctgccgaaaaaagcacaggatatattt
gtcgatgaatggcttaaagatgcactttgttcgttaaaccccgatatcgccaaacagccg
gattacgccgatgaagtgatccataagcttcgagggttgatgcttgaagctcgtaatact
ggcttagctaaagctaacgaaaacttccaagaatggctgatggcggaaaaaagcctgccg
tttggtgagaatggcgatcacatcactattaacctgattgatatcgacaatatcaaaaac
aaccacttcgttgtgtcacagcaggtgcactatattgcggctaccgaagtctattttgac
atcgtgctttacgtgaacgggattcccttagttgtgggtgaggtaaaaaccgctactcgc
cccagtgttacctggcaagatggcgccgccgattttatgggcggtaaaaagcactactgg
aaaaacgtagagcccttctttgtgcccaacctgctttgtttcgcgagtgaaggtaaaact
tttgcttatggtgctatcaacgcccgagtgaaagattgggggccatggcacaatacagat
cagcgtgaagaaattttgcctggaatggcttctgtcttacaaagtgttgagggtttgcta
aatccaaaaacattgttgcaattacttgagtcgttcgcgctattctcgacgattaaaacg
ggcaaacatacgcctcctaaacgaattaaaattctgcctcgatacccccaatttgaagct
gctaagcagattgtggatagggtacgcaacggctatccgaaaaaaggcttgatatggcat
ttccagggctcgggtaaatccctattgatgctctacgcagcaaagatgcttcgtgctgac
aatgagcttaataacccaaccgtattggttgtggtagacagacgtgacctagacagccag
atcaatgagacctttggtggtgcggatgttaaaaacctaatcaaagtacaaagctgcaaa
aagctgggtgaacatattgagcaagacagccgtggtattttaattaccaccatttttaaa
tttaaagatgtcgtaatagacgacagcaacccgaacggcctcaataaccgcgacaacatt
attgtgttagtagacgaagctcatcgcacacaggaaggtggcttaggggagaagatgcgc
tgggcattacctaaagcacatttttatggtttaaccggcacaccaatttcaggcattgac
cgcaatacatttaagttatttggtgcggaagaagacccaggtcgctacatgaatcgctac
agctataagcaatcgattcgtgacggggcgaccaaccctgtgaagtttgaaccgcgcctt
gctgagcttcgcgttgatcgcgatgccatcaaccaagaatttgagcagctcgccaaagat
aataacttggacgacgaagaaaaagcggcgctttctaaacgcgctggcaagttggctgtg
atgcttaaagcctctaagcgcatggccgccgtcagtaatgatattgtcgaacacttttac
agccacgttaaaccgaaaaagatgaaaggcatggtggtcgtttatgaccgtgatgcctgc
gttcagatgtattacttgctgggtgaaaagctagggtttgatgccgttgaagtggtcatg
aacgttgaccaggctcctatcattgacgacaaaggtaagaaaaacaaagactgggctaag
tgggaaagcgataaggacattccagttaaggaagatgacttcaaacgttggcagataatt
gatgccgaagaacaaactcagaaagatcttatcgaaggctacaaggacccacagaacccg
ttacagcttattattgttaccgcgaaattgcttacaggttttgatgcgccgatttgctat
tgcatgtatttagataagccgttacgagatcatacgcttcttcaggctatgtgtcgtacc
aaccgcttatatgagactgacgagacacgcaaaaatattggcttgatcattgattacctg
ggcgtgtttgaaaatctgcgtaccgcgcttgcttataatccagatgagatcgaaggtgtt
gtcgaaggcattgaagctttcaaggcgttgttacctacacaactggaaaaatgtttgtct
tttttccccggtgtagatagaacccttgaagggtttgaaggtgtgatggcggcacaagac
tgcttgccgagcaatgaaaagcgtgacgaatttgctgcaagctttggtgtacttaccaag
ctatggtcagccattaatccagacccgtttttaaacccatatcgccaagactacaaatgg
cttgcgcaaatctatgagtcggttcgacctgttagtcaaactggcgcgctagtttgggct
gctctgggtcctgaaaccatcaagattattcacgagaatacggacataaaacgtattagg
gatgatattgatgagctcattatggatgagcatgcgattttcactctaacggaaaaagag
caagagcaaagagctaagcgtcttgagatagaccttatgggccgactgcgtggcagcggc
gagccgaagtttgtggaactaggcgagcgtttagaaaagctgcgccaagattacgaagct
ggggtaatcaaggctattgactggttgaaagcactgttagacaccgcaaaggacactgtg
caagctgaacgcgaaactggtgagaaagtagttaccgaagaggataatgttcaggccctt
accaaactgtttatggaaacccgtccaaatagcactcctcaagttatccaggatgtggtt
gagcaaattgacaagattgttaaagctaagcgttttgacggttggcaaaactccaacagt
ggcccccgagaaatacagaaagcattattggtaacactggcccagtttggtcttggtaaa
gataaagaactatttaacaaagcttatggatatatagaagagtattattga

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