KEGG   Alteromonas mediterranea DE1: amad1_05840
Entry
amad1_05840       CDS       T02340                                 
Name
(GenBank) type III restriction enzyme, res subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
amaa  Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amaa02048]
    amad1_05840
Enzymes [BR:amaa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     amad1_05840
Prokaryotic defense system [BR:amaa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   amad1_05840
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD N_NLPC_P60 DUF3801 USP8_dimer
Other DBs
NCBI-ProteinID: AFV84686
LinkDB
Position
1293043..1295943
AA seq 966 aa
MVSQTNEQALESAIDERFFWQFLQKTQEEELAKLQKNNSSDWQRKLLERFDRLIKKHGIL
HLLKKGLSVDDAHFNLLYPAPLASSSEKVKQNFADNVFSCTRQVRYSMANPLQEIDMVLF
INGIPLITLELKNAWTGQTARYHGQKQYRDDRDAAQALLTFGRCLVHMAVDTDEVYMTTK
LSGGSTFFLPFNKGHNLGQGNPPNPTGHKTAYLWQEVFTKESLANIIQHFVRLDGSSKDP
LPKRTLFFPRYHQLDVVRKLVDHAAQYGVGQTYLIQHSAGSGKSNSITWAAYQLIETYPA
SSDVAGGKSLEQPLFDSVIVVTDRRLLDKQLRDNIKEFSEVKNIIAPANKSSELKQALEN
GKKIIITTIQKFPFIIDGIADLSDKRFAVIIDEAHSSQSGSAHDNMNRAMGKSEIEEAED
AQDKILQAMKSRKMRGNASYLAFTATPKNSTLEKFGQRQEDGSFKPFHLYSMKQAIEEGF
ILDVLANYTTYKSYYEIEKSIADNPEFDTKKAQKKLRAYVERSQQTIDTKAEIMLEHFVP
HVVNAKKLKGKGKGMVVTQNIETAIRYYKAIRRILEEQGNPFKVAIAFSGTKEVDGIEYT
EADINGFAESDTKDMFDTDEYRLLVVANKYLTGFDQPKLCAMYVDKKLASVLCVQTLSRL
NRSAPKWGKKTEDLFVLDFFNSVEDIQSAFDPFYTATSLSQATDINVLHELKDEMDDVGV
YEWYEVEDFVTRYFKNEDAQTLSPIIDVAAARFDHELELEAEAKVDFKIKAKQFVKIYGQ
MASIMPYEMVSWEKLFWFLKFLIPKLKVEDPDADAIDELLDSVDLSSYGLQRVKLNHSIK
LSDQEAELDPQNPNPRGAHGGEKETDPLDEIIRTFNERWFQGWSATPEEQKVKFVNIAES
IRNHPDFESKYKNNPDPHNRDLAFEKMLKEIMLQRRKDELELYKLFAGDSAFKASWTQSM
QRMVGM
NT seq 2901 nt   +upstreamnt  +downstreamnt
atggtcagtcaaaccaatgaacaagcattagagtcggccattgatgaacgttttttctgg
caatttctgcaaaagacacaagaagaagagttggccaaactgcaaaagaacaactcctca
gattggcagcgtaagttactcgaacgatttgaccgactgattaagaagcatggcattctg
catttacttaagaaagggctaagcgtagacgatgctcatttcaatttgctctatccagcc
cctttggcaagcagtagtgagaaggtaaagcaaaactttgcagacaacgtgtttagttgt
actcgccaagtgcgctattccatggcaaatcccctacaagaaatcgacatggtattgttt
atcaacggaataccattgataacgctggagttgaagaacgcatggacggggcaaacagca
cgttatcacggccaaaagcagtatcgggatgatcgagatgcagcgcaagccttgctgacc
tttggccgctgcctagtgcatatggcggtcgataccgacgaagtgtatatgaccaccaag
ttatcaggtggcagtaccttcttcttgccgttcaataaaggtcacaatcttggacaaggc
aatccgccgaacccaactggccataaaacggcatacctatggcaagaagtattcaccaaa
gaaagcttggcgaatattattcagcattttgtgcgtctggatgggtcaagcaaagatcca
ttaccaaagcgaactctgttctttcctcgataccaccaattagatgtggtgagaaaattg
gtggaccatgccgcccagtacggtgtcggtcagacttacttaattcaacactctgccggt
tcaggtaagtctaattctattacctgggctgcttatcagttaattgaaacctatcctgct
tcgtctgatgtggcaggcggaaaaagcttggagcagccgttatttgactctgtaattgtg
gttaccgatagacgcctattggacaagcagctgcgggataacattaaagagttttctgaa
gtaaagaacattattgccccggcgaacaagtcttctgagcttaagcaggcgctcgaaaat
ggcaaaaagatcatcataacgacgattcagaaattcccgttcattattgatggtatcgcc
gatcttagtgacaagcgctttgcggtgattattgatgaagcacacagctcacagtctggt
tcggcgcatgacaatatgaaccgagcgatgggcaagtctgaaatcgaagaggcagaagat
gctcaggataaaatccttcaggcgatgaaatcgcgcaagatgcgcgggaatgcatcgtac
ttggcatttaccgctacaccaaaaaacagcactttggagaaatttggtcagcgccaagaa
gatggctctttcaagccgtttcacttgtattcgatgaaacaagccattgaagaaggtttc
atcttggatgtgctcgcaaattatacgacgtacaaaagttattatgagattgagaaatca
atcgctgataaccctgagtttgataccaaaaaggcgcagaaaaaactcagagcttatgta
gagcgaagccagcaaacgattgataccaaggcagagattatgctggagcattttgttcca
catgtcgtgaatgcgaaaaagctcaagggtaaaggtaaaggaatggtggtcactcaaaat
attgagacggccattcgatactacaaagcgataaggcgaatacttgaggagcaagggaac
ccctttaaagttgccattgctttctcaggaaccaaagaagttgatggtattgaatatacc
gaagcagatattaatggttttgccgagtcagataccaaagatatgtttgataccgatgag
tatcgacttttagtggttgctaacaagtatctgactggctttgaccagcctaagctttgc
gccatgtatgtggataagaagctcgccagtgtcttgtgtgtacagacattatctcgtctc
aatcgaagtgcgcctaaatggggtaaaaaaacagaagacctgtttgttttggactttttc
aactcggttgaagatattcagtcagcattcgatcctttctacacagcaacgtcattgtcc
caagctacagatataaacgtgctgcacgagttgaaagatgaaatggacgatgtcggtgtg
tacgaatggtatgaagttgaagactttgttacgcgttatttcaagaatgaagacgcccag
acactcagtccaatcattgatgttgcagcagcacggtttgaccatgagctggagcttgaa
gctgaagctaaagtggactttaagattaaagccaagcagttcgtgaaaatctatgggcag
atggcgtctatcatgccttatgaaatggtcagctgggaaaaactgttttggttcctgaag
tttttaataccgaaattgaaagtggaagatcccgatgctgatgctattgatgagcttctc
gattctgtcgatctgagttcatacggtttgcaacgtgtgaagcttaaccacagcattaaa
cttagtgaccaagaagcggagcttgatcctcaaaatccgaacccacgtggggcgcatggc
ggtgaaaaagaaactgacccgctggatgaaatcattcgcacatttaatgaacgatggttc
caaggctggagtgccacacctgaagagcaaaaggttaagttcgtgaacatcgctgagagt
atccgcaatcacccagattttgaatctaaatacaaaaacaacccagatcctcataatcga
gatttggccttcgaaaaaatgctcaaggaaattatgctgcaacgccgtaaagatgaactt
gagctctacaagttgttcgcaggagattcagcatttaaagcctcgtggacgcaaagtatg
caacgaatggtaggtatgtag

DBGET integrated database retrieval system