KEGG   Alteromonas mediterranea DE1: amad1_06060
Entry
amad1_06060       CDS       T02340                                 
Name
(GenBank) IncF plasmid conjugative transfer pilus assembly protein TraC
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
amaa  Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amaa02044]
    amad1_06060
Secretion system [BR:amaa02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   amad1_06060
SSDB
Motif
Pfam: TraC_F_IV P-loop_TraG AAA_10 DUF5934 DUF87 AAA_22 HNOB nSTAND3 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: AFV84725
LinkDB
Position
1334159..1336558
AA seq 799 aa
MKASLYSGQRASELLPVLAYSDDEQLFFMEDQSVGFGFLCDPLPGGDESVADRVNVLLNN
DWPKDTLLQFGLYASPDIQTDLQRMMGLRHRQSDPLLRASIRKRADFLDGGTVQSIEEST
QTQVRNFQLIVTCKLPLESPIPTERELSRASALRASFSQALATVGFRVTEMTDRNWLAAI
SAQLNWGKDASWRNPSPIRSEADKPLREQVLDYDRAIKVDSQGLMLGDYRVKTLSFKRLP
ERIWFGHAASFAGDMMTGSRGLRGSFLLNVTIHFPSAEAMRSRLETKRQWAVNQAYGPML
KFVPVLAAKKKRFDVLFEALQEGDRPIRANMTLTLFSPTEEASISSVSNARTYFKELGFE
LMEDKYFCLPIFLNALPFGADRQAMNDLFRFKTMATRHVIPLLPLFADWKGTGTPVINFV
SRNGQIMSVSLYDSGSNYNCCIAAQSGSGKSFLVNEIISSYLSEGGQCWVIDVGRSYEKL
CEVYDGEFLQFGRDSGICLNPFEIVEDYDEEADVLVGLLAAMAAPTQSLTDFQMANLKRQ
TRELWEKKGRAMLVDDVAEALKNHEDRRVQDVGEQLYPFTTQGEYGRFFNGHNNIRFKNR
FTVLELEELKGRKHLQQVVLLQLIYQIQQEMYLGERDRRKIVFIDEAWDLLTQGDVGKFI
ETGYRRFRKYGGSAVTVTQSVNDLYDSPTGKAIAENSANMYLLGQKAETINALKKEGRLP
LGEGGYEYLKTVHTVTGVYSEIFFITEMGTGIGRLIVDPFHKLLYSSRAEDVNAIKQLTR
KGLSVADAISQLLKERGYE
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgaaagcctctttgtattcaggacaacgcgcttcagagctattgccagtattggcctat
tcagacgatgagcaactgtttttcatggaagaccaaagtgttggctttggttttctatgt
gacccattgccgggtggtgatgagtctgttgcagacagggttaatgttctactcaacaac
gactggccaaaagacactttgctgcaatttggcctttacgcctcgcctgatattcaaacc
gaccttcagcgcatgatgggcttacggcatcgtcaatctgatccattgcttagggcgtcg
atacgcaaacgtgcggatttcctcgatgggggcacggttcaatcgatagaagaatcgacc
cagactcaggtacgcaactttcaactgatcgtcacctgcaaattgcctttggaaagtcct
attccgacggagcgtgagttgagtcgagcatccgcgcttcgggcttctttctcgcaagcg
ctggcaacggttggttttcgcgtcactgagatgactgaccgaaactggctcgcggcaata
agtgctcagcttaactggggaaaagatgcttcctggcgtaatccatcaccaatccgcagt
gaggcagataaaccacttcgggagcaagtgttggattatgaccgagctatcaaggtggat
agccaaggtctgatgctgggcgattaccgagttaaaaccttatcgtttaaacgcttgcct
gagcggatctggtttggtcatgccgcaagttttgcgggcgatatgatgacgggcagtcgc
ggtttacgcggcagctttttgctaaatgtcaccattcactttccctcagctgaggcgatg
cgatctcgtttagagacgaagcgtcagtgggcggtcaatcaggcctatggcccgatgctc
aagtttgtgccggtgcttgcagccaagaaaaagagatttgatgttctttttgaagctttg
caagaaggtgatcgtcctattcgggcaaatatgactttgacgctgttttccccaacggaa
gaagcgtccatcagttctgtttcaaatgctcgaacctatttcaaagaactcggatttgag
ctgatggaagacaagtacttctgtttgcccatttttctgaatgccctgccatttggtgcc
gaccgccaggcgatgaacgacttgtttcgattcaagaccatggcgacacggcatgtgatc
cctctgttgcctttgtttgcggattggaaaggcactggcacgccggtgattaactttgtt
tcccgtaatggccagatcatgagtgtgtccctttatgactcgggcagtaattacaattgt
tgcatcgcggcgcaatcgggatcgggtaagtcattcctggtgaacgaaatcatctcctcc
tacctatcagaaggcgggcaatgctgggtgattgatgttggccgctcttatgaaaagctg
tgtgaagtctatgacggtgagttcttacagttcgggcgagacagtggcatttgcttaaat
ccgtttgaaatcgttgaggactatgacgaagaagcggatgtgttggttgggttattggcc
gcaatggccgcacctacgcagtcattaaccgattttcagatggcaaacctaaagcgtcag
acccgtgaactgtgggagaaaaaaggtcgtgccatgttggttgatgatgtggcagaggct
ttaaaaaatcatgaagaccgacgtgtgcaagacgtgggtgagcagctctatccgtttacg
acacagggcgaatatggccgattctttaatggccacaacaatattcgcttcaaaaaccgt
ttcaccgttctggagttagaagagcttaaggggcgtaagcatctacaacaagtagtgttg
cttcagcttatctaccaaatccaacaagagatgtacttaggtgagcgggatcgtcgcaag
attgtgttcattgatgaagcttgggatctgctgactcaaggtgatgtcggtaagttcatt
gagacgggttaccgtcgatttcgaaaatatggcggcagtgctgtaacggtaacgcagtcg
gtcaacgatttgtatgacagcccaacaggtaaagccatcgctgaaaactcggccaatatg
tacctgcttggccaaaaagctgaaaccatcaacgcgctcaaaaaagaaggccgcttgcca
ctaggtgaaggcggctatgaatacctgaaaacggttcataccgtcacgggtgtctattcc
gagattttctttattaccgaaatgggcaccgggattggccgcctcattgtcgatccgttt
cacaagctgttgtactcgtcccgtgcagaagatgtaaacgcgattaaacagttaacgcgc
aaaggcctttctgttgctgatgccatctctcagttgttgaaggagcgaggctatgaataa

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