Alteromonas mediterranea DE1: amad1_06910
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Entry
amad1_06910 CDS
T02340
Name
(GenBank) Holliday junction DNA helicase motor protein
KO
K03550
holliday junction DNA helicase RuvA
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
amad1_06910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaa03400
]
amad1_06910
DNA repair and recombination proteins [BR:
amaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
amad1_06910
RecFOR pathway proteins
amad1_06910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
IMS_HHH
HHH_8
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AFV84893
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All DBs
Position
1532874..1533494
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AA seq
206 aa
AA seq
DB search
MIGRIRGTLAEKQPPEILVDVAGVGYEIHMPMTSFYQLPAVGEEVVVYTHFVVREDAQLL
FGFADKMERGLFRELIKANGVGPKLGLAILSGMSAGQFLASVQNEDVSALVSLPGIGKKT
AERLVVELKDRLAKFGKAQSIAVPPPSGDLLSPNTIVEVNDAREEAQSALIALGYKPAQA
SKLVESVYSEGMESEALIREALKAAI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgataggacgaattcgcggtacgttggctgaaaaacagccaccagaaattcttgtagat
gtggccggtgttggctacgaaattcacatgcctatgacgagcttttatcagcttccagca
gtgggtgaagaagtcgtggtatacacgcactttgtggttcgcgaagacgcccaactgctg
tttggctttgccgacaaaatggagcgaggtttatttcgcgagctaattaaagcaaacggt
gttggtccaaaacttggtttggctattttatccggcatgtcggcaggtcagttcttggca
agcgtgcaaaacgaagatgtatctgcgctggtgagtttacccggcataggtaagaaaacg
gccgagcgtttagtggtagaacttaaagaccgattagctaagtttggcaaagcgcagagt
attgctgtcccgcctccgagtggcgacttgttatcgccaaacactattgttgaagttaac
gacgcgcgggaggaagcgcaaagcgcacttatcgcgttaggttataagcccgcgcaggca
agtaagttagttgaaagcgtttatagcgagggcatggaaagcgaagcccttattcgcgaa
gcgctaaaagcggccatttaa
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