Alteromonas mediterranea DE1: amad1_07130
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Entry
amad1_07130 CDS
T02340
Symbol
asnC
Name
(GenBank) asparaginyl-tRNA ligase
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
amad1_07130 (asnC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amaa01007
]
amad1_07130 (asnC)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amaa03016
]
amad1_07130 (asnC)
Enzymes [BR:
amaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
amad1_07130 (asnC)
Amino acid related enzymes [BR:
amaa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
amad1_07130 (asnC)
Transfer RNA biogenesis [BR:
amaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
amad1_07130 (asnC)
Prokaryotic type
amad1_07130 (asnC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DUF4106
Motif
Other DBs
NCBI-ProteinID:
AFV84937
LinkDB
All DBs
Position
complement(1584533..1585930)
Genome browser
AA seq
465 aa
AA seq
DB search
MTHAPVVDVLKGKYAVGESVTVKGWVRTRRDSKAGLSFIALHDGSCFDPVQVIALNSLSN
YADIQRLTAGCSLSVTGTVKESQGQGQALEIDATEVDIVGLVENPDTYPMAAKRHSIEYL
REYAHLRPRTNVIGAVTRVRNCLSQAIHRFFHEKGYYWISTPILTASDTEGAGEMFRVST
LDMMNLPLDDKGNVDYSEDFFGKETYLTVSGQLNVETYCTAMSKVYTFGPTFRAENSNTS
RHLAEFWMIEPEVAFAELKDVAQLAEDMLKYVCKALLEELPDDMAFFAQRIKKDAVERLE
KLVSSDFVRMDYTDAIEILQNCGKKFEFPVEWGIDLSSEHERYLAEEHVGAPIIMQNYPK
DIKAFYMRINDDGKTVAAMDVLAPGIGEIIGGSQREERLDVFDARLEEMGLSKEDYAWYR
DLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIPFPRTPGNASF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgcgcccgtagttgacgtacttaaaggtaagtacgccgtaggcgaatcggta
accgtaaagggttgggtaagaacacgccgcgactctaaagcggggttatcatttattgca
ctacacgatggtagttgcttcgatcctgtacaagttattgcactaaattctctgtcaaat
tatgccgatatccagcgcctaactgcaggttgttcattatcggtaaccggtacagtaaaa
gaatcgcaaggccaagggcaagcactagaaattgatgctaccgaggtagacatcgtcggt
ttggttgaaaaccctgatacctacccaatggcggcaaagcgccacagcatagaatatcta
cgtgaatacgcacacctgcgccctcgcactaatgttattggtgcggtcacccgtgtacgt
aactgtttatctcaagctatccatcgcttcttccacgaaaaaggctactactggatctct
accccaattttaacggctagcgatacagaaggcgcgggtgaaatgttccgcgtatcaaca
cttgatatgatgaaccttccgctagacgacaaaggcaacgttgattactcagaagatttc
ttcggtaaagaaacctacctaacggtatcgggtcagcttaacgttgaaacatactgtacg
gctatgtctaaggtttatacctttgggccaacgttccgcgctgaaaactcaaatacgtct
cgccaccttgcagaattctggatgatcgagcctgaagtggcttttgctgaattgaaagat
gtcgcgcagcttgctgaagacatgttgaagtatgtgtgtaaagcgttgctagaagagtta
cctgatgatatggcattcttcgcccagcgcattaagaaagatgcggttgagcgtttagaa
aagctcgttagctctgactttgttcgcatggattacactgacgctattgaaattcttcaa
aattgcggcaagaaattcgaattccctgttgaatggggtattgatttgtcttctgagcat
gagcgttaccttgccgaagagcatgttggtgcaccaatcatcatgcagaactatccgaag
gatattaaagccttctacatgcgcattaacgacgacggcaaaaccgttgcagcaatggac
gttctagcgccaggcatcggcgaaattatcggtggttcacagcgtgaagaacgtttagat
gtattcgacgctcgtcttgaagaaatgggactatcgaaagaagactacgcatggtatcgc
gacctacgccgctacggcactgtgcctcactcaggtttcggtctaggtttcgaacgtctt
gttgcatacgtaaccggcatgcaaaacgtacgtgacgtgatcccattcccacgtacacca
ggtaacgctagcttctaa
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