Alteromonas mediterranea DE1: amad1_09275
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Entry
amad1_09275 CDS
T02340
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaa03021
]
amad1_09275
03009 Ribosome biogenesis [BR:
amaa03009
]
amad1_09275
Transcription machinery [BR:
amaa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
amad1_09275
Ribosome biogenesis [BR:
amaa03009
]
Prokaryotic type
rRNA transcription factors
amad1_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_KhpA-B
PipX
Motif
Other DBs
NCBI-ProteinID:
AFV85364
LinkDB
All DBs
Position
2075115..2076611
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AA seq
498 aa
AA seq
DB search
MNKEILLVAEAVSNEKQVPREKIFEALEFAIASATKKKNEGEIEVRVSIDRTSGDFDTFR
RWLVIPDDQEQENPFAEITISAAQIDEPEIQLGDYVEEQIESIKFDRITTQTAKQVIVQK
VREAERQQMIAEYEDKVGELVTGTVKKVNRDNIIIDLGNNAEGVIYRDDMLPRETFRPGD
RVRGLLYVIRPEARGAQLFISRTHPDMLVELFRLEVPEIAEETLEIKSAARDPGSRAKIA
VKTNDKRLDPVGACVGMRGSRVQAVSGELGGERVDIVLWDENPAQFVINAMAPAEVASIV
VDEDSNNMDVAVEADNLAQAIGRSGQNVRLASQLTGWELNVMTVEDLNKKHEEENAKVLN
LFTAGLDIDEEFASVLVDEGFTTLEEVAYVPASELLAVEGLDEDMVEELRNRARAFLTTR
ALANEESLEGAEPTEALLNLEGMSKHVAYVLASRGVIDLEELAEQGTDDISDIDELDEEK
AGELIMAARNIVWFSEEE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaattttgttagtggcggaagccgtttcaaatgaaaaacaagtgcctaga
gaaaagatttttgaagcgctagagtttgctattgctagcgcaacaaaaaagaaaaacgaa
ggcgaaattgaagttcgtgtaagcatcgacagaacgtctggtgactttgatacattccgt
cgctggttggttatccctgatgatcaagaacaggaaaacccatttgctgaaattacgatt
tctgcggcgcaaatcgacgaaccagagatacaacttggcgattatgtggaagaacagatt
gaatctatcaaattcgaccgcataactacgcaaacagctaagcaagttatcgtacagaaa
gtacgtgaagctgagcgtcagcagatgattgctgagtacgaagataaagtgggtgagttg
gtaacaggcacggttaagaaagttaaccgcgataatatcatcatcgatttgggtaacaac
gctgaaggtgttatctaccgcgatgacatgcttcctcgtgaaactttccgtcctggtgac
cgtgtacgtggtcttctttacgtaattcgtccagaagcgcgtggcgcacaactatttatc
agccgtacgcatccagacatgctagttgaactattccgcttagaagtgccagaaatcgcg
gaagaaacactagaaattaaatctgctgctcgcgacccgggctctcgtgcaaagattgct
gttaaaaccaacgataagcgtttagaccctgtgggtgcgtgtgttggtatgcgtggctca
cgtgtacaagctgtgtcgggtgaactgggcggcgaacgtgttgatatcgtgctttgggat
gaaaacccagcgcaatttgttatcaatgcaatggcacctgctgaagtagcatcaattgtt
gttgacgaagacagcaataacatggatgtagcagttgaagccgataatctagcgcaagcg
attggccgtagcggtcaaaacgttcgcttagcaagccagctaacaggctgggaacttaac
gtgatgacggttgaagacctcaacaagaagcacgaagaagaaaacgcgaaggtactgaat
ctatttactgctggtttggatattgacgaagaatttgcgtctgtcctagtagatgaaggc
tttacgacactagaagaagtggcatacgtgccggcaagtgaacttctagcggttgaaggg
ttagatgaagatatggttgaagagttgcgcaatagagcgcgcgctttcttaaccacgcgt
gcactagcgaacgaagagtcgcttgaaggtgcagaacctaccgaagccttattaaatctt
gagggtatgagtaaacacgtggcttatgtgttggccagccgcggtgttatcgacctagag
gaattagcagaacaaggtaccgatgatatcagtgatatcgatgaactagacgaagagaaa
gccggtgagttaatcatggcggctcgtaatatcgtatggttcagtgaagaagagtaa
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