KEGG   Alteromonas mediterranea DE1: amad1_09640
Entry
amad1_09640       CDS       T02340                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
amaa  Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amaa03009]
    amad1_09640
Enzymes [BR:amaa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     amad1_09640
Ribosome biogenesis [BR:amaa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    amad1_09640
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AFV85435
LinkDB
Position
complement(2153927..2154469)
AA seq 180 aa
MSSNSQVVLFNKPFQVLSQFTDADGRETLKDYIDIPDVYAAGRLDRDSEGLLVLTNDGKL
QHKLANPKAKTSKTYWVQVEGIMHEKAMQALRDGVELKDGMTLPAKVKAMDEPQVWPRNP
PVRFRQSIPTSWVSITITEGRNRQVRRMTAHVGYPTLRLIRYRVGSWTIDGIENGKYVCF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtcttcaaactctcaagtggtgctgttcaataagccctttcaagttctatcccagttt
acagacgctgatggcagagaaaccctgaaagactatatagatattcccgatgtctacgcc
gcaggacggttagaccgtgattcagaaggtctattagtgcttaccaatgacggtaaactt
caacacaagcttgccaacccaaaagctaaaaccagcaaaacgtactgggttcaagtagag
ggtatcatgcatgagaaagccatgcaggcgctaagggatggcgtagaacttaaagacggt
atgaccctcccagccaaagtgaaagcaatggacgagcctcaagtttggccaagaaaccca
cccgtgcgatttaggcagtcgatccctactagttgggtatcgattactattaccgaaggg
cgtaaccgccaagttcgacgaatgactgcacatgtgggctaccctacactacgcttaata
agatatcgcgtgggcagttggaccattgacggcatagaaaacggtaagtacgtctgtttt
tag

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