Alteromonas mediterranea DE1: amad1_10210
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Entry
amad1_10210 CDS
T02340
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
amad1_10210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_10210
Enzymes [BR:
amaa01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
amad1_10210
Transporters [BR:
amaa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
amad1_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Wzy_C
AAA_22
ABC_ATPase
AAA_16
Lactamase_B_5
AAA_29
AAA_30
nSTAND3
Zeta_toxin
MMR_HSR1
Gifsy-2
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AFV85549
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All DBs
Position
2266548..2268296
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AA seq
582 aa
AA seq
DB search
MQQADNSDFQIKRFLNYLKAYKVPFVFAIIGMIGYSAVDTFVFAQLQPMIDESLGKNDHD
YLRLAAYAIVPLFLLRGTFNFMGSYTLSWIGAQVVMRMRQQLFDKYIHLPVSFHDNHSVG
GLISKVTYDTEQVANASGKALLTLVREGALVIGLLCVMFYYSWQLSLIFLLIGPVVAVIV
SFVSKRFRVVSKNIQHSMGNLTSSVEQAVKGHKVVIMFGGQEIEQNRFKQKNNHNRQQTM
KLSVTSILSVSSIQVIASIALAVVLYIASTPGMLEKLTAGVFINVVFCMVMLLKPLKQLT
TINNQFQKGMAACASIFEILDEADEEDSGRTKIERATGKIEFDDVTFSYPGKHTPALSNV
SFTANPGQSVALVGRSGSGKSTISSLLTRFYVPQEGQIRLDDMPLNDVDLKALRAQFAVV
SQNVTLFNDTIANNIAYGARQNVSRKEIENAARMAHVEEFLANLPDGLDTVIGENGLMLS
GGQRQRIAIARAILAEAPILILDEATSALDTESERLIQDALEKLQKRCTSIVVAHRLSTI
ENADCIMVVEQGRIIEKGKHDELLEKGGHYAQLHALQFGETK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagccgacaactcggattttcaaataaagcgctttttgaattatctcaaagcg
tacaaagtcccgttcgtatttgccattatcggaatgattggttattccgctgttgatacc
tttgtattcgctcagctccagccaatgattgatgaatcgctaggcaagaacgatcacgat
taccttcgtttagctgcctacgccattgtgccgctgtttttgcttcgcggtacgtttaat
tttatgggcagttacacgcttagctggattggtgcgcaggttgtcatgcgcatgcgacaa
cagctgttcgacaaatatattcatttacctgtgtcttttcacgacaatcattctgtgggt
gggttaattagtaaggttacttacgataccgagcaggtagctaatgcgtcgggcaaagcg
ttgcttacccttgtccgagagggcgctcttgttatcggtctgctttgcgtaatgttttat
tactcatggcaattgtcgttaatttttcttttaattggccctgtggttgctgttattgtc
tctttcgttagcaagcgttttcgtgttgtgagcaaaaacatacagcactctatgggtaac
cttacctcgtcggtcgagcaggcggtgaaagggcataaggtagtgatcatgtttggcggt
caggaaatagagcaaaaccgttttaaacagaaaaacaaccacaatcgacagcaaaccatg
aagctttccgtcacttcaatcctaagtgtctcgtctattcaagttattgcgtcgatagcg
ctggcggtagtgttatacattgccagtacgccgggcatgctcgaaaaattaaccgcgggt
gtgtttatcaatgtggtgttttgtatggtaatgctgttgaaaccattaaaacagctcacc
accattaacaatcaatttcaaaagggcatggctgcctgcgccagcatcttcgaaatactc
gatgaagctgatgaagaagacagtggccgcacaaaaatagagcgagcaactggcaagata
gaatttgatgacgttaccttttcataccccggcaagcatacgccggcactatctaatgtt
agctttacggcaaacccaggacaatcggttgcactggttgggcgttcaggaagcggaaaa
tcaacaatttcatcgctgcttacgcgtttttatgtgccgcaagaggggcagatacgttta
gacgacatgccgcttaacgacgtagacttaaaagcattgcgcgctcaattcgccgtggta
tcgcaaaatgtcacgctgtttaacgataccattgctaataatattgcgtacggtgcacgc
caaaacgtgtctcgcaaagaaattgaaaatgcggctagaatggcccacgtagaagagttt
cttgcaaatttaccggatgggttagacacggtgattggtgaaaatggtctaatgctttcc
ggcggtcagcgccagcgtattgccattgcaagggctattttggcagaagcgcccatactt
attttagatgaagcaacctcggcgctagacaccgagtcggaacgcttaattcaagatgcc
ttggaaaagctacaaaagcgttgtactagtattgtggtggcacaccggctttcaaccatc
gagaatgcagactgtattatggtagttgagcaggggcgtattattgaaaaaggtaagcat
gatgaattgcttgaaaaaggcggtcattatgcgcagctccacgcacttcaatttggtgag
actaagtga
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