Alteromonas mediterranea DE1: amad1_10235
Help
Entry
amad1_10235 CDS
T02340
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amaa03009
]
amad1_10235
Enzymes [BR:
amaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
amad1_10235
Ribosome biogenesis [BR:
amaa03009
]
Prokaryotic type
ribosomal protein modification factors
amad1_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AFV85554
LinkDB
All DBs
Position
complement(2271281..2272738)
Genome browser
AA seq
485 aa
AA seq
DB search
MTVETFDPNKVANKTTTLETPVKVLSDNQSSQQGVGSRIGFVSLGCPKNLVDSERILTQL
RTEGYDVVPTYNDADLVIVNTCGFIDAAVEESLDTIGEALKENGKVIVTGCLGVKEDEIR
ELHPNVLAITGPHAYETVVEQVHEHLPKPQHNPFADLIPDHGVKLTPRHYAYLKISEGCN
HRCTFCIIPSMRGDLVSRPVGNVLDEAKRLKEAGVKELLVISQDTSAYGVDVKHRTGFWN
GMPVKTHMQQLCEQLGEMGIWVRLHYVYPYPHVDDLIPLMNDGKILPYLDIPFQHANKRI
LRLMKRPGSAERVLERVKKWREQCPSLVIRSTFIVGFPGETEEEFEELLDFLREAQLDRV
GAFAYSPVEGARANDLPDPVPEDIKQERLARFMEVQGEISAARLKARIGNEYQVVIDSVD
AEGAVGRTYADAPEVDGLVHLNGVYDVKPGDRVWAEVIHANEHDVWAVLSEDQDDEEAHA
TEGAE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaaacgtttgatccaaacaaagtcgcaaacaaaaccacaacgcttgaaaca
ccggtcaaagtactgagtgacaatcaatcttcacaacaaggtgtaggtagcagaattggt
tttgtcagcttagggtgccctaagaatttggttgattctgaacgtattcttactcaactt
cgcaccgaaggttatgacgtagtgcctacctacaacgatgctgatctcgttatcgtcaac
acttgtgggttcattgacgccgcagttgaagaatcgttagataccattggtgaagcatta
aaagaaaatggcaaagttattgtaacgggttgcttaggggtaaaagaagacgaaattcga
gagctacacccaaatgtcttggctattaccggccctcatgcatacgagacggtagtagag
caagtacacgagcatttaccgaagcctcagcataatccgtttgcagatcttattcctgat
cacggtgtgaaactaacgccccgccattacgcatatttaaaaatttcagaaggctgcaac
caccgctgcacattctgcattatcccctcaatgcgtggagatttagttagccgccctgtt
ggcaacgtgcttgatgaagccaaacgattaaaagaggcgggcgtgaaagagctattggtt
atctctcaagataccagtgcgtacggtgtagatgtaaaacacagaacagggttctggaac
ggcatgccggtgaaaacccacatgcaacagctttgcgagcaactgggtgaaatgggaatt
tgggtacgcctccactacgtttacccctacccccatgttgatgacctcattccactgatg
aatgatggtaaaattctgccttatcttgatattccattccagcacgccaataagcgcatt
cttagacttatgaagcgcccaggtagtgcagaaagagtactagagcgcgttaaaaaatgg
cgtgaacaatgcccgtcattggtaattcgctctacgtttatcgttggatttccaggagaa
acagaagaagagtttgaagaacttttagactttctacgggaagcccagcttgatcgcgtt
ggtgcattcgcttattcacctgttgaaggggcaagagcaaacgacctacctgacccagta
ccagaagatataaaacaagaacgccttgcgcgcttcatggaagtacagggtgaaataagc
gctgcgcgattaaaagccagaattggtaatgagtatcaagtggttattgatagcgttgac
gccgaaggtgcggtaggtcgaacttatgccgatgcgcctgaagtggacggcctcgttcat
ttaaacggggtttacgatgtaaaaccaggcgatcgtgtatgggctgaagtcattcacgct
aacgaacacgatgtatgggctgtactatctgaagaccaagacgatgaagaagcgcatgca
acggagggcgcagagtag
DBGET
integrated database retrieval system
