Alteromonas mediterranea DE1: amad1_10790
Help
Entry
amad1_10790 CDS
T02340
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaa03400
]
amad1_10790
Enzymes [BR:
amaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
amad1_10790
DNA repair and recombination proteins [BR:
amaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
amad1_10790
Prokaryotic type
amad1_10790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFV85665
LinkDB
All DBs
Position
complement(2419775..2421406)
Genome browser
AA seq
543 aa
AA seq
DB search
MLSDNTKPPITIIWLKRDLRLRDHEPLFRAVASNERILLLYCWEPSLIEEPHMSVRHWHF
IQQSIDDINGQLPEHVNVLTLHMEAVDALAFISRFYTINAVRSYQEIGLKVTYNRDLRVA
NYLNNRRIPFLEAKCGAVIRGLPHRAQWQANWEEYFAESTYDYDLKRANWVKWNVHVDIQ
KASLTLSEVSALYAAKKYINKDYLSKYCGVLSEDGLIDFSAMQPGGERRAWQVLKDFFND
RGQYYHQHISKPEYARRACSRLSPYLAWGNISIKQVYQSVQRQKHKKRALPIHEKKRWSR
ALSALTSRLHWHCHFIQKFESEHSIEWRPMNSAYENFPYIDGPEAERRFYHWSIGQTGYP
LVDACMRALRQTGYLNFRMRAMVTSFLCHHLNVHWIKAAHYLATQYLDFEPGIHYPQIQM
QASVTGIHTVRLYNPVSQSKKLDPEGEFIKKWVPELGSLPSDAVHAPYSLLPLEAQMFDF
ALDRDYIAPIVDIAQHNRATAKRLWDYRERDDVIKEAKRIIHRHTMQNSPSRAWFKSKTT
QNH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgacaacactaaaccgcctattacaataatatggttaaagcgagatcttcgc
ttgcgagaccatgaacccctttttcgtgctgtcgcatctaatgaacgtattctcttactt
tattgctgggaaccgtcattaatagaagaaccgcacatgagcgtgcgtcactggcacttt
attcagcaaagtatcgacgatataaatggtcaactgccagaacatgtcaacgtactaacg
ctgcatatggaggccgttgatgccctagcctttatttcacggttttacacgattaacgcg
gttagaagttaccaggaaataggtttaaaggttacgtataaccgcgacttacgggtcgct
aactatctgaataataggcgcatcccctttttggaagcaaaatgtggcgcggtaataaga
ggattgcctcatcgagcgcagtggcaagctaactgggaggagtattttgctgaaagcacc
tatgattacgacctaaagcgtgcaaattgggttaaatggaatgtgcatgttgatatacaa
aaagcgtcgctaacactgagtgaggtttccgctttatatgcggcaaaaaaatatataaat
aaggattacctgtcaaaatactgtggcgttttatccgaagacggccttatagattttagc
gcaatgcagcccggtggcgaacggcgagcgtggcaagtacttaaggacttttttaatgat
cgcggtcagtactatcaccaacacatttctaagcccgagtacgcaaggcgtgcttgttct
cgtttgagcccataccttgcttggggcaatatctcgattaagcaagtgtatcaaagtgta
cagcgccaaaaacataagaaacgagcgttgccaatacacgagaaaaagcgctggagccgt
gccctgtccgcgttaacatcaaggttacactggcattgccactttattcaaaaatttgaa
agtgaacatagtattgaatggcgccctatgaacagcgcatatgaaaacttcccttacata
gacgggccggaagcagaacgtcgcttttaccactggagtattggtcaaacgggctatcct
ttggttgatgcctgcatgcgtgcacttaggcaaactgggtatctcaactttcgcatgcgt
gccatggtaacaagctttttatgccatcatttaaatgtacattggatcaaggctgcccac
tatcttgctacgcagtatttggactttgaaccaggtattcactaccctcaaattcaaatg
caagcaagcgtgaccggtattcacacggttcgcctatacaaccctgtgtctcagtctaaa
aagctagatccagagggtgagttcatcaaaaagtgggtacctgagcttggttcactgccc
agtgacgcggtacatgcgccttattcgctgttaccgcttgaagcgcaaatgttcgacttt
gccctcgaccgtgactatatcgcccctattgtggacatagctcaacacaaccgcgcgacc
gccaaacgcttgtgggattaccgggagcgagatgatgttataaaagaagcgaagcgcatc
atacatcgtcatacaatgcaaaatagccccagccgagcgtggtttaagtccaagacgact
caaaaccactag
DBGET
integrated database retrieval system
