Alteromonas mediterranea DE1: amad1_11060
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Entry
amad1_11060 CDS
T02340
Name
(GenBank) seryl-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
amad1_11060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amaa01007
]
amad1_11060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amaa03016
]
amad1_11060
Enzymes [BR:
amaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
amad1_11060
Amino acid related enzymes [BR:
amaa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
amad1_11060
Transfer RNA biogenesis [BR:
amaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
amad1_11060
Prokaryotic type
amad1_11060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CC_Bre1
Motif
Other DBs
NCBI-ProteinID:
AFV85719
LinkDB
All DBs
Position
complement(2475655..2476947)
Genome browser
AA seq
430 aa
AA seq
DB search
MLDPKCLRSDIEQTAKRLAARGFNLDVAAFSSLEEKRKTLQSRTQDLQNERNVRSKSIGK
AKAQGEDIAPLLAEVGKLGDELDAAKAELSELLEEINTLTQGIPNLPHESVPEGKDEDDN
VEISRWGEPRTFDFEVKDHVDVAEGLNNGLDFATASKLTGSRFVVMRGDIARLNRALAQF
MLDTHTQEHGYQEMYVPYLVNADSLYGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVP
LTNIARDEILDAKTLPVKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDS
FDALEALTGHAEVILQKLELPYRKVLLCTGDMGFGACKTYDLEVWLPAQNTYREISSCSN
MLDFQARRMQARFRNPETNKPELLHTLNGSGLAVGRTLVAILENNQQADGSVTVPKALVP
YMAGQEVIKA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttagatccaaagtgtttgcgaagcgatatagaacaaacagctaagcgattagctgcc
cgtggttttaacctcgacgtagcagctttcagttcgcttgaagaaaaaagaaaaacactt
cagtccagaacacaggatctgcaaaacgagcgtaatgtacgaagtaaatccattggtaag
gcaaaagcgcagggtgaagatattgcgccgcttttagctgaagtgggtaaacttggcgac
gagcttgatgccgctaaagcagagcttagcgaactgttagaagaaattaatacccttacg
caaggcattcctaatttgccgcatgagtcggtaccagaagggaaagacgaagacgacaac
gttgaaatttcccgttggggtgagccgcgtacgtttgattttgaagtaaaagatcacgta
gacgttgctgaaggcttaaacaacggcctagatttcgcgaccgcgagtaagctaacaggc
agccgctttgtggtaatgcgtggcgacattgctcgtttaaaccgtgcgcttgctcagttc
atgctagatacccatactcaagagcatggctatcaggaaatgtacgtgccttatcttgtc
aatgccgacagcctatacggtacaggtcagttgcctaagtttggtgaggatctattccac
actaagccagcaacggaagaggggcaggggctaagtctaattccaacggcggaagtaccg
ctaacaaacatcgcccgtgatgaaattttagatgctaaaacgctgcctgtgaaaatgacg
gcacacacaccgtgcttccgctcagaagcgggttcgtacggtcgtgacacccgtggtcta
attcgtcagcatcaattcgacaaggtagaactagtacagctagttaagccagaagatagc
ttcgacgcgctagaagcgcttactggccatgcggaagttattctgcaaaagctagagcta
ccttaccgcaaagtgttgctatgtacgggtgacatgggctttggtgcatgtaaaacctat
gatcttgaagtatggctacctgcacagaatacttaccgcgaaatctcttcatgctcaaac
atgctggatttccaagcgcgacgtatgcaggcaaggttccgcaaccctgaaaccaataaa
cctgaactgctacacacactgaacggttctggtttggcagtagggcgtacacttgttgct
attttagagaataaccaacaggcagacggtagtgttactgtacctaaagcgcttgtgcct
tacatggctggtcaggaagtgattaaggcgtag
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