Alteromonas mediterranea DE1: amad1_11770
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Entry
amad1_11770 CDS
T02340
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_11770
Transporters [BR:
amaa02000
]
Other transporters
Pores ion channels [TC:
1
]
amad1_11770
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AFV85859
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Position
2632685..2635267
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AA seq
860 aa
AA seq
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MKSPTPALPTLNKITFYLLGAPLLVAIPILAYAEVDDVSQPTTSTLEHIVVHAQKTPQNL
QDVPVAVTALSGKDLVETVSRDVFDLQNYVPAFGAFQNQSVTNSGFSIRGIGTSSQNFGF
ESSVGLYVDSVYRSRQNALINDVVDIESIEVLRGPQGTLFGKNTAAGAMTLTTTPPSHND
RDGFAEAIVGNDALVRLSAGSSFSLVEDILALRLSGFTSHSDGFITDEESGKTLNNRNRS
AIKAQLLYTPSDSVSVKVIADYGELDERCCGALTYQNNIQANQVEGKFGTDALLLQPPFD
ATVYGREDFYRFNTSLSQTPISQMEDKGLSVQVDFDINKAWHLVSLSAYRAFDSLDSVDT
DFSNADLLNATNDAQQQSFSQELRLHYRSGVLEGLIGAYYYSQNLDLTFDTTTQADFSVF
FNAVAGDLLPLANAIDELSALTSGLIAPSASPAPPNTAFIHNADQEQDSFAVFTQFDWRF
SDMLTLTSGLRFTQEKKTIKGQFDEQGPGINGLEQDPTKWPNINSALLGLQEIGAALAQG
DFPSQSSLNAIAPFQQAGWGYFFLGSAAVMPRPDLNESIDDDQLTGTVKLAYHPQDNTLA
YVSFATGYKAGGTNTDRILPGLSPLFNAEKSRSTEVGIKHDFEDVGLRVNAAAHYTKIQD
FQATTFTGTGFNLQNAGDIAVKGIELEATWLITSNTELHANASRTLANFDEFKQGTCWVA
YTWHTGIDDPGRVNPGDPFCARDGDRVGFEPQSSLSLTLNHHFALGNYPLTASIDYQYTG
DVFLDDANDPYKYSGAFSLFNARLRVKITQWDSEIIAWSRNLFDEQYVARSGFDVPVQTG
KIMAYPGAPRSFGVTFRKTF
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgcctacacctgctctacctacgttaaataaaatcacattttacctattgggt
gcgcctttactcgtggctatacctattctggcttatgcagaagttgatgatgtttctcaa
cccactacgagcacgcttgagcacattgttgttcatgcccagaaaacaccgcagaatttg
caggatgtgccagtggcagttactgcgttatctggcaaggatttagtcgaaaccgtaagc
agagatgtgtttgaccttcaaaattacgtgcctgctttcggcgcgtttcaaaaccaaagt
gtaactaactcaggcttttctatacgaggtatcggtacttcttcacaaaactttggtttc
gagtcttctgttggactctatgttgatagcgtttatcgctctcggcagaatgctcttatc
aatgatgtagtcgatattgaatcgatagaagttttacgcggcccgcagggcaccttgttt
ggcaaaaatactgctgcgggggccatgacacttaccactactcccccttcccataacgat
cgcgacggttttgctgaagctattgtcgggaacgatgcgcttgtgcgcttaagcgccggc
tcgtccttttcacttgttgaagatattctggcgcttcgcctatccggcttcacgtcgcac
agcgacggctttattacagacgaagaaagtggaaaaacgcttaacaaccgaaatcgctct
gctatcaaagcgcagttgctgtatacacctagtgacagcgttagcgtaaaggtaattgcc
gactatggcgagttagacgaacgctgctgcggcgctcttacctaccaaaacaatatacaa
gcaaaccaagtagagggtaagttcggtactgatgcgttacttttacagccccccttcgac
gccacggtatacgggcgcgaagacttttaccgtttcaatacgtcgttgtctcaaacgccc
atatctcaaatggaagataaaggcctatcggttcaagttgatttcgatattaataaggcg
tggcatttagtaagtttaagtgcctatcgggcatttgacagcctagactcggtagatact
gacttttctaacgcggatttacttaatgcgaccaacgatgcgcagcaacagtcgttctct
caggagctaaggcttcactatcgcagtggtgtacttgaaggactcattggtgcctactat
tacagtcaaaatttagaccttacttttgatacaacaactcaggccgatttcagcgtgttt
tttaatgcggtcgcaggtgacttactcccattagcaaacgctatagatgaactcagtgcg
ctaacctctggtcttattgccccttctgcttctccagcgccacccaacaccgcttttata
cataatgcagatcaagagcaagacagttttgcagtgtttactcaattcgattggcggttt
agcgatatgctaaccctgacctcggggttacgatttacgcaagaaaagaaaacaattaaa
ggccaatttgatgaacaagggccagggattaatggcctggaacaagatcctacaaagtgg
ccgaatatcaacagcgctctccttggcttgcaagaaattggggccgcattggcgcaaggg
gactttccttcacaaagttcgcttaacgccatagcccccttccaacaagcgggctggggt
tacttctttttaggctcagctgccgtaatgccccgcccagatttgaatgaaagcatagat
gatgaccagctcacaggtacagtaaagctagcttaccaccctcaagacaacaccttagcg
tatgtaagcttcgccactggctataaagcgggtggtaccaacacagatagaattcttccg
ggcctaagcccgctatttaatgcagaaaaatctcgaagcactgaagtcggtataaaacac
gactttgaggacgttggtcttagggtaaatgcggcggcgcactacacaaaaattcaagat
tttcaggcaaccacgtttactggcaccgggtttaacttgcaaaacgcgggagatatcgcg
gttaaaggtattgagctagaagcaacgtggctaatcacatcaaacacagaattacacgct
aacgcatcgcgcacgcttgctaattttgacgagtttaaacaaggcacgtgttgggtggct
tacacctggcacaccggcatcgacgacccgggccgggttaatcctggcgatccgttttgt
gcaagagacggcgatcgcgtggggttcgagccgcaaagttctctatcactgacgcttaac
caccattttgcgcttggtaattacccgcttaccgccagtattgactatcaatacacaggt
gatgtttttctagatgatgccaacgacccttacaaatactcaggcgcattttcgctgttt
aatgcaagattacgcgtgaagattactcaatgggacagcgaaatcatagcgtggtcgcgc
aacctattcgatgaacagtacgttgcgcgaagcggtttcgacgtgccggtacaaaccggc
aaaatcatggcctatcccggcgcaccaagaagctttggcgtgactttcagaaagacgttt
taa
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