Alteromonas mediterranea DE1: amad1_11945
Help
Entry
amad1_11945 CDS
T02340
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00061
Fatty acid biosynthesis
amaa00071
Fatty acid degradation
amaa01100
Metabolic pathways
amaa01212
Fatty acid metabolism
amaa02024
Quorum sensing
amaa04146
Peroxisome
Module
amaa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
amad1_11945
00071 Fatty acid degradation
amad1_11945
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
amad1_11945
09145 Cellular community - prokaryotes
02024 Quorum sensing
amad1_11945
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amaa01004
]
amad1_11945
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amaa04147
]
amad1_11945
Enzymes [BR:
amaa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
amad1_11945
Lipid biosynthesis proteins [BR:
amaa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
amad1_11945
Exosome [BR:
amaa04147
]
Exosomal proteins
Exosomal proteins of breast milk
amad1_11945
Exosomal proteins of breast cancer cells
amad1_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Tox-PAAR-like
Motif
Other DBs
NCBI-ProteinID:
AFV85894
LinkDB
All DBs
Position
complement(2675582..2677261)
Genome browser
AA seq
559 aa
AA seq
DB search
MPLDMTANANTTEVITSPLSMLYHWEQNRGNDVFLTQPIKGEYHDYTWKQVAEQARKVAA
RLREFNFPQGSRIGIFSKNCAEWFITDLGIMMAGHVSVPIFSTAGPDTVQYVLKHADVQL
LFVGKLDNTAEQVASIPTEYLTVAFPYPNIATKQQWAEFMDIAPIKDSPVPDMDDIMTII
YTSGSTGQPKGVVHSYNTACWAARRSLDQLGINENDRTMSYLPLAHITERVLVELSSYYS
GGKIHFVEDLATFQRDVGHCQPTLFISVPRLWTKFQMGVLAKMPQKKLDTLLKIPILNKI
VAKKIRNGLGINNARLWASGSAPLAPAVIEWFAKIGINISEGWGMTENSAYGTGSVPFRH
DKIGCIGKPYDGVDIRTSEEGEIQVKSPCNMLEYYLEPEKTAEVFTEDGYLRTGDKGVID
ADGYVKITGRLKDIFKTAKGKYVTPAPIEAKFMENPIVEQVCVTGTNLPQPVALLVLSEE
AHKKNKASIESSLKKTFDAINAKLESHQVMDRVVVMKKEWSIENDLLTPTLKVKRHVLEE
RFEGIIQGDYSEKLVWVNA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgccgctagacatgacagcaaacgcaaataccacggaagtaataacatcgccattaagt
atgttgtaccactgggaacagaaccgtgggaacgatgtatttcttacccagcctattaaa
ggtgaatatcacgattacacgtggaagcaagtcgccgaacaagccagaaaggtagcggcc
cgcctgcgtgaattcaattttccacaaggtagccgaattggaattttttcaaaaaactgc
gccgaatggtttattaccgacctaggcataatgatggcaggtcatgtctcggtgcctatt
ttctctacggcggggccagacactgttcaatacgtattaaagcacgctgatgtacagtta
ctttttgtgggcaagctagataataccgcagagcaggtagcgtctattccaactgaatac
ctaacggtggcgtttccttaccccaacattgctaccaagcaacaatgggctgagtttatg
gatattgcgcctattaaagattcgcctgtaccagatatggacgacatcatgaccattatc
tatacatcaggtagtacaggtcagccaaaaggcgtagtacacagctacaatactgcttgt
tgggctgctcgccgctcgttggaccagctcggcattaatgaaaacgaccgtacaatgagt
tacttgcctctggcgcatatcacggaacgagtgcttgtagagctttccagctattacagc
ggtggaaagattcactttgtcgaagacctggctacatttcagcgagatgtggggcattgt
cagccaacactatttatttctgttccccgtttatggacgaagttccaaatgggcgtgcta
gcgaaaatgccgcaaaagaaactcgataccttgttgaaaattccaattctcaacaaaatt
gtagcgaaaaaaattcgcaatggtttaggcataaacaacgcgcgtttgtgggccagtggt
tctgcaccgttagcgcctgccgtaatcgagtggtttgctaaaataggtattaatatttct
gaagggtggggcatgaccgaaaacagtgcttatggcacaggtagcgttccgttccgccac
gataaaataggttgcattggaaagccttatgatggcgtagatatccgaacgtctgaagag
ggtgagatacaggttaagtcgccatgtaatatgctggaatattacttagagccggaaaaa
accgctgaagtgtttaccgaagatgggtatttgcgtactggcgataaaggggtgattgac
gctgatggttacgtaaaaatcacaggccgcttaaaagacatcttcaaaacggctaaaggc
aagtacgtgacgccagcgccaattgaagcgaagtttatggaaaaccctatcgtagagcag
gtatgtgtaacaggtacaaaccttcctcaacctgtggctctgctagtgcttagcgaagag
gcgcacaagaaaaataaggcaagcattgaatcgagccttaagaaaacctttgatgccata
aatgctaagttggaaagccatcaagtgatggatcgtgttgtggtcatgaaaaaagagtgg
agtattgaaaacgacttacttacacccacgttgaaagtgaaacgacacgttttagaagag
cgtttcgaaggtattattcaaggcgattactccgaaaaacttgtgtgggtaaacgcgtag
DBGET
integrated database retrieval system
