Alteromonas mediterranea DE1: amad1_12175
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Entry
amad1_12175 CDS
T02340
Name
(GenBank) DNA-binding transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amaa03000
]
amad1_12175
Transcription factors [BR:
amaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
amad1_12175
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_24
HTH_Tnp_ISL3
HTH_29
MarR
Penicillinase_R
TrmB
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AFV85940
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Position
2726274..2727125
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AA seq
283 aa
AA seq
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MNILEKITQNKAAFSKSEKKVAEVILANPQTAIHSSIATLAKMSDVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRHVDENDSPDEYTNKIFESTMASLEVARQSVDVNVVNR
VVDLLTQAQKISFFGLGASASVAHDALNKFFRFNVPVVYFEDILMQRMSCMNCSDGDVVV
LISHTGRTKSLVEIAQIARMNDATVVGITSADSPLAQECSYVLSLEVPEDTDMYMPMASR
IAQLTLIDVLATGFTLRRGNKFRENLKRVKDTLRGSRFEKRND
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttagaaaaaatcactcaaaataaagctgcattcagtaaatccgagaaaaag
gtagccgaggttatacttgctaacccgcaaacagctattcattcgagtatagcaaccctt
gctaaaatgtcggatgtgagcgaaccaacggttaaccgcttctgccgacgtcttgataca
aaaggtttccctgatttcaaattacatttggctcagagccttgctaacggtacgccttat
gtaaatcgtcacgtcgatgagaacgatagccctgacgaatacaccaataaaatttttgaa
tcgaccatggcgtctttagaagtggcaagacaatctgttgacgtgaatgtggtaaatcgc
gttgtagatctgcttacacaggcacaaaagatttctttcttcggccttggcgcttcggca
tctgttgctcatgacgcgcttaacaaattttttcgctttaatgtgccggttgtctatttt
gaagacatcctcatgcaacgcatgagttgtatgaattgttcagacggcgatgttgttgtt
ttgataagtcataccggacgaacaaaaagcttagttgagattgcccaaattgcacgcatg
aacgatgcaaccgtggtaggcattacttctgcagatagcccactggctcaagaatgtagc
tatgtattatcacttgaagtaccagaagataccgacatgtacatgcctatggcatctcgt
attgcgcagttaaccttgattgatgtacttgcaacaggctttacgctgcgccgaggcaat
aagtttagagagaatttaaagcgggttaaagacacattgcgcggctcgcgctttgagaag
cgaaacgactaa
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