Alteromonas mediterranea DE1: amad1_12970
Help
Entry
amad1_12970 CDS
T02340
Name
(GenBank) acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00061
Fatty acid biosynthesis
amaa00071
Fatty acid degradation
amaa01100
Metabolic pathways
amaa01212
Fatty acid metabolism
amaa02024
Quorum sensing
amaa04146
Peroxisome
Module
amaa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
amad1_12970
00071 Fatty acid degradation
amad1_12970
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
amad1_12970
09145 Cellular community - prokaryotes
02024 Quorum sensing
amad1_12970
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amaa01004
]
amad1_12970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amaa04147
]
amad1_12970
Enzymes [BR:
amaa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
amad1_12970
Lipid biosynthesis proteins [BR:
amaa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
amad1_12970
Exosome [BR:
amaa04147
]
Exosomal proteins
Exosomal proteins of breast milk
amad1_12970
Exosomal proteins of breast cancer cells
amad1_12970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AFV86094
LinkDB
All DBs
Position
complement(2913324..2914976)
Genome browser
AA seq
550 aa
AA seq
DB search
MEKTWLKHYDPRVSAEIDADRYASVVDIFEQSVKKFKNKEAFINMGHSISFEELDTLSAQ
FAAYLQASGLKRGDAVAIMMPNLLQYPVAMFGILRAGMVVVNVNPLYTARELKHQLNDAN
AKAIVIVENFACTLEEVIADTNLQEVFLTALGDMLPAPKRWIVNAVVKYVKKMVPSFTLP
ETTSFMSAVKKGQSLKYTRPEIDSGDLAFLQYTGGTTGVSKGAMLTHRNMVANLEQVSGI
LETVIEEGEDFVVTALPLYHIFALLANCLMFVKYGCRNLLITNPRDMPAFVNELSKYPFT
ILPGVNTLFNGLLNTPGFDELDFSKFKFGLGGGMAVQRPVAEKWEKVTGTVLLEGYGLTE
CSPVVAVNPPQIEAYKGAIGMPVPSTDIKLLDDDGNPVEKGEPGEMWVKGPQVMKGYLNR
PEATEDILKEGWLATGDIATVDDEGYFYIVDRKKDMILVSGFNVFPNEIEEVAAMHDHIV
EAAAVGVPHEVSGEVVKLFVVKNNDALTEKDVIAHCRNHLTGYKVPKQVVFKDDLPKTNV
GKILRRELRD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaacctggcttaagcattacgaccctcgcgtttccgcagaaattgatgccgat
cgttacgcatctgtagtagacattttcgagcagtcggtaaagaagtttaaaaataaagaa
gccttcattaacatggggcattcaatttcgtttgaggagctagatacgctttcagctcaa
tttgctgcttacttacaagcaagcgggcttaagcgcggtgatgcggtggcaattatgatg
cctaaccttctccaatatcctgtcgccatgtttggtattttgcgcgcaggtatggtggtg
gtgaatgtaaacccgctctacacggccagagaactaaagcatcaacttaacgacgccaat
gctaaagccattgtaattgttgaaaactttgcatgtactcttgaagaagtgattgcagat
acaaaccttcaagaagtctttttgaccgcactgggcgacatgttgcctgcaccgaagcgc
tggattgttaatgcagtagttaaatacgtcaaaaagatggtgccttccttcaccttgcct
gaaactacttctttcatgtcggcagttaaaaaaggtcagtcgcttaaatacacgcgacct
gagattgatagcggcgatctcgcgttcttgcaatatacaggtgggacaacgggcgtatcg
aaaggcgcaatgctgacacaccgcaatatggtggcaaacctagagcaggtctcgggtatt
ttagaaaccgtaattgaagaaggtgaagattttgttgtaacagcactaccgctttaccac
atctttgcgttactggctaactgcctgatgttcgttaaatacggttgtcgcaacttgctt
attactaacccgcgagacatgccggcgtttgtaaacgaactaagcaaatacccgttcacc
attttacctggcgtaaacaccttgtttaatggtcttttgaatacaccagggtttgatgag
cttgattttagcaagttcaaatttggtctaggtggcggcatggcggtacagcgtcctgtt
gccgaaaagtgggaaaaggttacgggcacggtgttgttagagggctatggccttactgaa
tgttcgcctgtggtagcggtaaacccacctcaaattgaagcctataaaggcgcaattggt
atgccggtaccttctactgatattaagttattagacgacgatggcaatccagttgaaaaa
ggtgagccaggcgaaatgtgggtaaaaggcccgcaggtgatgaagggatatttgaaccgc
cctgaagcaacagaagatattctaaaagagggttggctagccactggcgatattgctacc
gtagatgatgaaggttacttctatattgttgaccgtaaaaaggatatgatcctagtctca
ggctttaacgtgttccctaacgaaatcgaagaagtcgctgctatgcacgatcacatcgtt
gaagcggctgcggttggggttcctcatgaggttagcggcgaggttgtgaagttgtttgtg
gtcaaaaacaacgacgcgctgaccgagaaagacgttatcgcgcactgccgtaaccactta
acgggttacaaagtgcctaagcaagttgttttcaaagacgacttaccaaaaaccaatgta
ggtaaaattctgcgtcgggagcttcgagactag
DBGET
integrated database retrieval system
