KEGG   Alteromonas mediterranea DE1: amad1_12995
Entry
amad1_12995       CDS       T02340                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
amaa  Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amaa03400]
    amad1_12995
Enzymes [BR:amaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     amad1_12995
DNA repair and recombination proteins [BR:amaa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    amad1_12995
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 UvrD-helicase T4SS-DNA_transf
Other DBs
NCBI-ProteinID: AFV86099
LinkDB
Position
complement(2918269..2920188)
AA seq 639 aa
MPTINNVFSSDGLLASAIKGFVPREAQTEMAKAVKHAIETTGSLIVEAGTGTGKTFAYLA
PALLSDGKAIVSTGTKNLQEQLFHRDLPLVKKALGSKRKTALLKGRANYLCLHRLAQHGG
NSTLVEKDVLGQLSEVKRWSSTTKTGDMGELKTLPEDARVLPLVTSTVDNCLGRDCPDYE
DCYLVKARRKALDADIIVVNHHLFFADMALKDTGFGELIPEADAIIFDEAHQIPDIASDY
FGESLSTRQIHDIAKDITLLFRTVLKDAGQLDKAADKCRMIASDLRLLFPDTAERGNWAE
ALDRDDVRMQVGKLAEALGVLHEVCKLHIGRDKDLDNMYERVVAAREQLDALSDNKQENV
SLWYETTQRHLIMHLTPLSIAAKFRRFVSSPPRGWIFTSATLMVNGGFDHFQRRMGLEDA
ETLGLDSPFNYPEQAMLCVPRYLPEPNSYAMRETLLETAKRLIKASRGRCFLLFTSHAML
REIAQKLEDEVDNPLLVQGTTTKQALLDAYLADEKAVLMGTGAFWEGVDVRGNDLVCVMI
DKLPFASPDDPLLQARMEDVKKRGANPFGVIQIPQAVITLKQGAGRLIRDPSDKGVLVIC
DNRLVTKPYAKTFVGSLPDMKRTRSLDEVEKFLAGIDEA
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgcccacaataaacaatgtattttcttcagatggccttcttgccagtgctattaaaggc
tttgtgcctcgcgaagcacaaactgaaatggctaaagccgttaagcatgccattgaaacc
acgggcagtttaattgttgaagcaggtacaggtacgggaaagacgtttgcgtatttggcg
cctgctttattgagcgatggcaaagcgattgtctcgaccggcacgaaaaaccttcaagaa
cagctctttcatcgcgatctccccctcgttaaaaaagcgcttggcagtaagcgtaaaacc
gcactgttaaaaggccgcgccaattacctttgtcttcaccggcttgcgcagcacggcggc
aattctacgctggttgaaaaagacgtgttggggcagctttcagaagttaagcgttggtcg
agcaccacgaagaccggggatatgggcgagttaaaaacgctgccagaagatgcccgagta
ctgccgttagtgacgtctaccgtggataattgcttaggccgggactgccctgactacgaa
gactgctatttggttaaagcgcgcagaaaggcgctggatgccgacattatcgtggttaac
caccacctattctttgccgatatggcgctaaaagataccggttttggagaacttattccc
gaggccgatgccatcatctttgatgaagcgcaccaaattccagatattgccagcgactat
tttggtgaatcgctttcaacacggcaaattcacgatatcgcgaaagacatcaccttgttg
tttaggaccgtattgaaagatgcgggtcaactagataaagccgccgataagtgcagaatg
attgcttctgacttacggttgctgtttcccgataccgcagagcgcggcaactgggcagag
gcattagaccgagatgatgtgcgtatgcaggtaggtaaacttgctgaagcccttggcgtg
ctgcacgaggtgtgtaagctgcatatcgggcgcgataaagatttagacaatatgtatgaa
cgggttgtggctgcaagagagcagctagacgcgctcagtgacaataagcaagaaaatgtc
agcttatggtatgaaactacgcaacgtcatttgatcatgcacctcacgccattgtcgata
gcggccaaatttagacggtttgtgtcatctccccctcgcgggtggatttttacctcggca
acgctaatggtcaatggtggatttgatcacttccagcgtcgaatggggttagaggatgct
gaaaccttagggttagacagcccatttaactaccccgaacaagccatgctttgtgtgcct
cgttatttaccagagcccaatagttatgccatgcgggaaacgcttctcgaaacggccaag
cggttgattaaagcaagtcgtggtcgctgcttcttactgtttaccagccatgcgatgctt
agagaaattgcacaaaagctggaggatgaggtagacaacccgctgctagtacaaggtact
acaacaaaacaagcactgttggatgcctatcttgctgatgaaaaagcggtgttaatgggc
acgggggcattctgggaaggggtagacgtacgcggtaatgaccttgtttgtgtcatgatt
gataaattgccctttgcatcaccggacgacccgctgcttcaggcccgtatggaagacgtt
aaaaagcgtggcgcaaacccgtttggtgttatacagatccctcaggctgttattacgcta
aagcagggagcagggcgcttaattcgagacccgtcagataagggcgtactggttatttgt
gataaccgtttggttaccaagccctacgcgaaaacctttgttggcagtctgcctgacatg
aagcgcaccagaagtttagacgaagtagaaaaatttttagccggcattgatgaagcctaa

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