Alteromonas mediterranea DE1: amad1_13310
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Entry
amad1_13310 CDS
T02340
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
amad1_13310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaa03400
]
amad1_13310
Enzymes [BR:
amaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
amad1_13310
DNA repair and recombination proteins [BR:
amaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
amad1_13310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
YihI
DUF8180
Motif
Other DBs
NCBI-ProteinID:
AFV86160
LinkDB
All DBs
Position
2994907..2995296
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AA seq
129 aa
AA seq
DB search
MVKYCFLYCMKKKRYTGDMGDIETNHLTPVRPSVNVRGIRILAIKMSVFMTTEKVSASFE
ETLSELEAIVNEMENGDLPLNKALEKFERGIALSRQGQQSLENAEQKVKILLSEQGEDTL
HTLPESEQP
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatactgctttttgtactgcatgaaaaaaaagcgatataccggtgatatgggc
gatatagagacaaaccatttgacccctgtgcgaccctcggttaatgtgcgcggtatacgt
attttggccattaaaatgagtgtttttatgacgacagaaaaagtatccgcgtctttcgaa
gaaacgttatcagagttagaagccatcgttaacgaaatggaaaacggtgatctgccgcta
aataaagcactagaaaagttcgaacgaggcattgccctctctcgtcaaggtcaacaatct
cttgaaaacgccgaacaaaaagtaaagatattgcttagtgaacaaggcgaagacaccctt
cacactctacctgaaagtgaacaaccctaa
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