Alteromonas mediterranea DE1: amad1_13385
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Entry
amad1_13385 CDS
T02340
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaa03400
]
amad1_13385
DNA repair and recombination proteins [BR:
amaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
amad1_13385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
DUF7125
AAA_14
nSTAND_NTPase5
AAA
SLFN-g3_helicase
RecA_N
ABC_tran
GvpD_P-loop
Zeta_toxin
Viral_helicase1
nSTAND3
AAA_24
AAA_16
cobW
Rad51
AAA_22
KdpD
NTPase_1
AAA_29
Zn_ribbon_8
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
AFV86175
LinkDB
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Position
complement(3009553..3010920)
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AA seq
455 aa
AA seq
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MAKRKTAYVCSDCGAEFPRWQGQCSECKAWNTISEFVVASAKSATRQTTSGYAGQTAAKI
ETLNAIDLESLPRFSSTFKELDRVLGGGIVPGAAMLIGGSPGAGKSTLLLQVMCQMAKSE
SALYVTGEESLQQVAMRAKRLSLPDDKLMMLAETNVETICDLALTQKPKIMVIDSIQVMH
VSDVQSAPGSVSQVRESAAYLTRFAKQNHIAMFIVGHVTKDGNLAGPKVLEHCIDSSMML
EGESDGRYRTLRSHKNRFGAVNELGVFAMTEKGLKEVSNPSAIFLSRGDNDTPGSSVMVI
WEGTRPLLVEIQALVDYSQMSNPRRIAVGLDQNRLSMLLAVLHRHGNVQMNDQDVFVNVV
GGVRVSETSADLALLLAMISSFRNRSLPRDLIVFGEVGLAGEIRPVPNGTERIIEAAKHG
FKRAVVPKANAPKQAINGMKVVPVARLSEALDALE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtaaaactgcttatgtatgttctgactgtggggcagagtttcctcgctgg
caagggcagtgttcagaatgtaaagcgtggaataccataagcgagtttgttgtagcaagt
gcaaaaagcgctacgcgtcaaactacgtcgggctatgctggacaaacggcggctaaaatt
gaaacgttgaacgccattgatcttgaatctcttcctcgtttttcgtccacttttaaagaa
ctcgatagggtgttgggtggcggtattgtccccggcgctgccatgttgataggcggctca
ccaggcgcaggtaaaagtacgttgcttttgcaagtaatgtgtcaaatggcgaaaagcgaa
agcgccctctatgtaacaggggaagaatcgttgcaacaagtggccatgcgggcgaagcgg
ttaagccttcctgacgataagttgatgatgctggcagaaacaaacgttgaaaccatttgc
gatttagcgcttacccaaaagcctaaaattatggttatcgactccattcaggttatgcat
gtttctgatgttcagtcggcgcctggtagtgtatctcaagttagagagagtgcggcttat
ttaacccgctttgccaagcaaaaccatattgccatgtttatcgttggtcacgtaaccaaa
gacggcaacctcgcgggccctaaagtactcgaacactgtatcgacagttcaatgatgttg
gaaggggagagtgacggccgctaccgtacgttgcgaagccacaaaaaccgctttggtgca
gtcaacgagcttggggtatttgccatgacggaaaaaggccttaaagaagtgagtaacccg
tctgcaatctttctaagccgtggcgataacgatacgccgggttctagtgtcatggtaatt
tgggaaggtacgcgcccattgctggtggaaatacaagccttggtggactactcacaaatg
tctaaccctaggcgaattgcagttggccttgatcaaaaccgattatccatgctgcttgcg
gtgcttcatcgccatggcaatgtgcaaatgaatgaccaggatgtatttgtcaatgtagta
gggggcgtgcgcgtttccgagaccagcgctgaccttgcgctgcttctggccatgatttct
agctttcgaaaccgctctttaccgcgcgatttaattgtatttggtgaggtgggcttagcc
ggtgaaattcgccctgttccaaacgggacagagcgcattattgaagccgcgaaacacggc
tttaaacgcgctgttgtgcctaaagcgaatgctcctaagcaagccataaatggtatgaaa
gttgtgcctgtagcccgtctatcagaagccttagatgcgctagaatag
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