Alteromonas mediterranea DE1: amad1_13540
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Entry
amad1_13540 CDS
T02340
Name
(GenBank) pilin like competence factor
KO
K02672
type IV pilus assembly protein PilW
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amaa02044
]
amad1_13540
02035 Bacterial motility proteins [BR:
amaa02035
]
amad1_13540
Secretion system [BR:
amaa02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
amad1_13540
Bacterial motility proteins [BR:
amaa02035
]
Pilus system
Pilus assembly proteins
amad1_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilW
N_methyl
NPCBM
Motif
Other DBs
NCBI-ProteinID:
AFV86206
LinkDB
All DBs
Position
complement(3040615..3041475)
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AA seq
286 aa
AA seq
DB search
MRGVKHMSQRGFSLVELMITLTLGLVISGAIIQVLVSSSVTNKLNQAVAQVQESGRFIMG
RLSAEFYEVGRYDQITANVDTSVDIVAEAAYVENHPIAVAGDFVNNATLGSVQTSSGGSD
KLVVSLLGQEDCTGNQHGYALGSEFHVVNHYFVSGSTLKCTGYDGRVLRGLKPQSVSPVT
VTLLDNVESFQVQFGISDSISTSQGQAISYVTADEIAGLRALNQQVVSLRWALMIKSYQN
EVRQTNAQKFALLNEASKTMDTAHYYQVFSKTLALRNMKNFVRSSQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtgtgaaacacatgagtcagcggggcttttcattagtcgagctcatgattacc
ttaaccttaggtttagttatttctggtgcaattattcaagtacttgttagtagcagtgtt
actaacaaactgaaccaagctgtcgctcaagtacaagagtcggggcgctttatcatggga
cgcctttccgctgaattttacgaagtaggccgctatgaccagattaccgcgaatgtagac
acctcagttgatatagtggccgaagctgcctacgttgaaaatcatcctattgctgtagcc
ggtgattttgttaacaacgctaccttaggcagcgtgcaaacgtctagtggcggcagcgat
aaacttgtagtgagcctgctaggtcaagaggattgcacgggaaaccaacacggttacgct
ttaggcagcgaatttcatgtggttaatcactactttgtgagcggcagtacgcttaagtgt
accggatacgatggacgtgttttgcgggggttaaagccgcagtcggtttcaccagttact
gtcacccttctcgataacgtagaaagctttcaagtgcaatttggcatttccgacagtatc
agcacatctcaaggacaagccatctcttacgtaaccgccgatgagatagcgggtttaaga
gcacttaatcaacaagttgtgtcactgcgatgggccctcatgattaaaagttatcaaaat
gaagttaggcaaactaacgcgcaaaagtttgcactgttaaacgaagcgtctaaaaccatg
gacacggcgcattactaccaggttttctcaaagacgctggcacttcgaaatatgaaaaat
tttgtcaggagttcacaatga
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