Alteromonas mediterranea DE1: amad1_13745
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Entry
amad1_13745 CDS
T02340
Symbol
hisS
Name
(GenBank) histidyl-tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
amad1_13745 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amaa01007
]
amad1_13745 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amaa03016
]
amad1_13745 (hisS)
Enzymes [BR:
amaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
amad1_13745 (hisS)
Amino acid related enzymes [BR:
amaa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
amad1_13745 (hisS)
Transfer RNA biogenesis [BR:
amaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
amad1_13745 (hisS)
Prokaryotic type
amad1_13745 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
Motif
Other DBs
NCBI-ProteinID:
AFV86247
LinkDB
All DBs
Position
complement(3090217..3091500)
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AA seq
427 aa
AA seq
DB search
MAKTIQAIRGMNDCLPEISGTWQKVESVLRQVVASYGYQEIRTPIVESTDLFKRSIGEVT
DIVEKEMYTFEDRNGDSLTLRPEGTASCVRAGNEHGLLYNQQQRLWYMGPMFRHERPQKG
RYRQFHQFGVETYGMDGPDIDLEVILLSARFWKSFGIEQHVKLQINTLGSNEARAAYRDT
LVAFLKERADQLDEDSLRRLETNPLRVLDSKNPDVQAAIADAPALIDHLDDESKAHFDTL
CARLTQAGIEFEINPRLVRGLDYYNRTVFEWVTDSLGAQGTVCAGGRYDGLVEQLGGKAT
PAVGFAMGIERLVLLLTTLTEEGQDTSFADVYVTAMGDDAQPYAIEVSEALRNALPNIRI
MMHCGGGNFKKQLKRADKTGARLALLLGSDEMQSREVGVKPLRDGQEQVTVSFDTLADKV
AEMLSAK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtggctaagactattcaggcaattcgaggcatgaatgactgcctaccggagatttccggc
acatggcaaaaggtagaatctgtacttcgtcaggttgtggcgagttatggctaccaggaa
atacgcacccccatcgttgaaagcaccgatctatttaagcgctctattggtgaagttacc
gatatcgttgaaaaggaaatgtatacctttgaagatagaaatggcgatagcttgacgctg
cgtccagagggtacagcaagttgcgtgcgtgcgggtaacgagcatgggttactgtataac
cagcaacagcgactatggtacatgggcccaatgtttcgccacgagcgcccacaaaaaggt
cgctatcgccagtttcaccaatttggcgttgaaacctatggcatggatggacctgacata
gatttagaagtgatcctccttagtgcacgcttctggaaatcctttggcatagagcagcat
gtaaaactacaaatcaacacgctaggctcgaacgaggcacgtgcggcgtaccgcgatact
cttgtggcgtttttaaaggaaagagctgaccagcttgatgaagattcgctgcgtcgcctt
gaaaccaacccgcttcgcgtgcttgattcgaagaacccagatgttcaggctgccattgca
gacgcgccggcccttatcgaccacttagatgatgagtctaaggcacatttcgacacattg
tgtgcgcgacttacacaagccggtatcgaatttgaaattaacccgcgcttagtgcgtggg
ttagactactacaacagaacagtgtttgaatgggtaaccgatagcttgggtgcgcagggc
acagtgtgtgctggcggtcgttatgatggtctagtcgaacagttaggtggtaaagcgact
ccagcggttggttttgccatgggtattgaacgtttggtactgttactgactacgctaacc
gaagaaggccaagatacaagctttgccgatgtttacgtgacagctatgggtgacgatgcc
cagccttatgccatagaagtgtcagaagcgcttcgtaacgcgctgcctaatatccgcatt
atgatgcactgcggtggcggcaactttaaaaagcaattgaagcgtgcagacaaaaccggt
gcacgtttggcgctgttgttaggtagtgacgaaatgcagtctcgtgaagtgggtgtaaaa
ccactacgcgacggtcaagaacaagttacagtaagctttgacaccttagcggataaggtt
gctgagatgctgagcgcaaaataa
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