Alteromonas mediterranea DE1: amad1_13790
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Entry
amad1_13790 CDS
T02340
Name
(GenBank) Selenocysteine lyase/Cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00450
Selenocompound metabolism
amaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
amad1_13790
Enzymes [BR:
amaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
amad1_13790
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
amad1_13790
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
AFV86256
LinkDB
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Position
complement(3098659..3099876)
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AA seq
405 aa
AA seq
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MSLDVAALRAQFPILSKTVDGKPLVYLDNAATTQKPQAVIDALVDFYTGTNANVHRGAHH
LSDEATRRYENARSSVASFINANAREEVIWTSGTTEAINIVANGLGQLLGEGDEVMVTEL
EHHANLVTWQQACRRAGATLNIVPIFDTGELDVEAFDRLLSSNTKMVAFPHVSNALGTVN
PIKLLTQKAKAVGAWVLVDGAQGIAHGGVDVQGIGCDFYAFSGHKLFGPTGIGCLWGKKE
VLETWPVWQVGGEMIKDVTYHEATWGPLPNRLEAGTPNIAGAIGMGAAVDWFSAFDVNAL
HEHEQKLLAYATEQAEAFEGMRIIGTAPNKVGVLSFLLEGAHPADVGFILDRQGVAIRTG
DNCAQPLMKRFGIPGTARASFSIYNTLEEVDSLFAALKKAKMMLA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagcctagacgttgcagcacttcgtgcccagtttcctattttatcaaagacggtagac
ggcaaaccgctagtctatctagataacgcagcgaccacgcaaaaaccgcaagcggtaata
gatgcgttggtagacttttatacgggcacgaacgcgaacgtgcatcgcggtgctcatcac
ttgtctgatgaagccacccgtcgatatgaaaatgcacgtagcagcgtcgcgagtttcatt
aatgccaacgcccgcgaagaagttatttggacgtcgggtaccactgaggccattaacatc
gtggccaatggcctaggtcagcttctcggtgaaggtgatgaagtgatggtcaccgagctt
gagcaccatgctaacttggttacgtggcaacaggcctgtcgtcgcgctggcgctacgctc
aacattgtacctattttcgatactggtgagcttgatgtagaagcctttgatagactgctt
tcaagtaacaccaaaatggtcgccttcccgcacgtgtcaaatgccttgggaacggtaaac
ccaattaaactgctaacgcaaaaagccaaagcagtaggggcctgggttttggttgatggc
gcgcagggtatagcccatggcggtgtagacgtacaaggtatcggctgcgacttttacgca
ttttcagggcataaacttttcggcccaacaggcattggctgcttgtggggtaaaaaagag
gtcctagaaacctggcctgtatggcaggttggtggcgagatgatcaaggatgtcacctat
cacgaagccacgtggggccctttacctaaccgcttagaagccggtaccccaaatatcgcc
ggcgctatcggaatgggggcggcagttgactggtttagcgcctttgatgtaaacgcatta
cacgaacatgagcaaaagctgctggcctatgccaccgagcaggctgaagcctttgaaggg
atgcgcattattggtacagcaccaaacaaggttggcgtgttaagctttttgcttgaaggt
gcgcatccagccgatgtgggctttattttagatagacaaggcgtggctattcgcacaggt
gataactgtgcgcaaccactgatgaagcgattcggcataccgggtaccgctcgtgcgtcg
ttttcaatttacaatacgcttgaagaagtagacagcttatttgctgcgcttaaaaaagca
aaaatgatgttggcctaa
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