Alteromonas mediterranea DE1: amad1_15025
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Entry
amad1_15025 CDS
T02340
Name
(GenBank) type IV pilus biogenesis protein PilC
KO
K02653
type IV pilus assembly protein PilC
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amaa02044
]
amad1_15025
02035 Bacterial motility proteins [BR:
amaa02035
]
amad1_15025
Secretion system [BR:
amaa02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
amad1_15025
Bacterial motility proteins [BR:
amaa02035
]
Pilus system
Pilus assembly proteins
amad1_15025
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
AFV86501
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Position
3386961..3388169
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AA seq
402 aa
AA seq
DB search
MAKAAITFIWQGKDRRGQSRKGEISATSLSEAKNLLRRQGISANKVKKLATPLFGGAKKI
TPADISVISRQIATMLAAGVTLIQSLEMIAQGHANPSMRKLLGEITEEVKSGNPLSSALR
KHPLYFDDLYCDLVYTGEQSGALETIYDRIATYKEKAEALKSKIKKAMFYPIAVLVVAFI
VTTILLIFVVPQFEEIFSSFGAELPAFTVFVLGISRFVQDYGIFIAMGVAAAGFMFVRAH
RRSQKLRDTVDRNILKIPVIGEILKKASIARFTRTLATTFAAGVPLIGALESAAGASGNA
VYRDAILYIRKEVAGGMPMHVAMRATQVFPDMVTQMIAIGEESGAVDEMLSKIATIYEAE
VDDMVDGLTSLLEPMIMAVLGVVIGGLIVAMYLPIFEMGNVV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagctgcaataactttcatatggcaaggaaaagaccgtcgagggcagtctcgt
aaaggcgaaatttctgccacatccttatctgaagcaaaaaatcttctacgccgtcaaggt
atatctgctaacaaagtcaagaaacttgcaacgcccttatttggcggcgcgaagaaaatt
acgccagcagatatctcggtaatatctcgtcaaatagctaccatgcttgccgcaggtgtt
acgcttatccaatctttagaaatgatagcgcagggccatgcgaacccttccatgcgtaaa
ctgcttggtgaaatcaccgaagaagtaaagtcgggtaatcctctttcttcagcgcttaga
aaacaccctctttattttgacgacctgtattgtgatttggtttacacgggcgaacaatcg
ggtgcccttgaaactatttacgaccgtattgccacctataaagaaaaggctgaagcacta
aaatcaaaaatcaaaaaagcgatgttttaccctatcgcggttttggttgttgcttttatc
gttacgactattctgcttatattcgttgtacctcagtttgaagaaatctttagtagtttt
ggcgcagaacttcctgcctttactgtatttgtattgggaatttcgcgatttgtgcaagac
tacggtatttttatcgccatgggcgtggcagccgcaggctttatgtttgtgcgtgcacac
agacgtagccaaaaactgcgcgatacggtagaccgtaatatattaaaaatacctgttatc
ggtgagatacttaaaaaagccagtatcgcccgctttacccgtacccttgccaccaccttt
gcggcaggtgttccgctaataggcgcgttagagtcggcagcgggggcatccggtaacgcg
gtttatcgcgatgccattttatatatacgaaaagaagtggccggtggtatgcctatgcat
gtagccatgcgcgcaacccaagtatttcctgacatggtgacgcaaatgatagccataggt
gaagagtctggcgcggtagatgaaatgctaagtaaaattgccaccatttacgaagcagaa
gttgatgacatggtagacggcttaaccagcttgcttgagcctatgatcatggctgtactt
ggtgtggttatcggcggcttgattgtggccatgtacctgcctatattcgaaatgggtaac
gtggtataa
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