Alteromonas mediterranea DE1: amad1_15990
Help
Entry
amad1_15990 CDS
T02340
Symbol
valS
Name
(GenBank) valyl-tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
amad1_15990 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amaa01007
]
amad1_15990 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amaa03016
]
amad1_15990 (valS)
Enzymes [BR:
amaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
amad1_15990 (valS)
Amino acid related enzymes [BR:
amaa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
amad1_15990 (valS)
Transfer RNA biogenesis [BR:
amaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
amad1_15990 (valS)
Prokaryotic type
amad1_15990 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
HIP1_clath_bdg
Motif
Other DBs
NCBI-ProteinID:
AFV86683
LinkDB
All DBs
Position
complement(3591894..3594668)
Genome browser
AA seq
924 aa
AA seq
DB search
MDKTFEPQSIEQQCYKSWEEAGLFKASGSGDPYCILLPPPNVTGSLHMGHGFQQTIMDAL
TRYHRMKGDNTLWQVGTDHAGIATQMVVERQLNAQGKTRHDLGREDFIKKVWEWKEHSGG
TITGQMRRLGTSPDWSREVFTMDEDLSKAVTEVFVKLHEEGLIYRGKRLVNWDPVLHTAV
SDLEVLNEEEDGHMWHMRYPLADGSGELVVATTRPETMLGDTAVAVHPDDERYQDFIGKE
IKLPITGRLIPVIADDYVDQEFGTGCVKITPAHDFNDYDMGKRHNLPMINILTDDAKIND
DAPEAYRGLDRFDARKQIVADLDAQGALVKIEPHKLKVPRGDRTGAVIEPYLTDQWYVAV
ESLAKPAIEAVESGEIRFVPENWNKTYYQWMHNIQDWCISRQLWWGHRIPAWYDENGNVF
VGRTEEEVREKHGLGSDVTLSQDDDVLDTWFSSALWPFATMGWPEETPDLETFVPSSVLV
TGFDIIFFWVARMIMMTKKFTGKIPFKDIYITGLIRDESGDKMSKSKGNVLDPIDLIDGI
DIESLVTKRTAGMMQPQLAEKIAKRTRKQFPDGIQAYGTDALRFTFAAMASTSRDINFDM
ARVEGYRNFCNKIWNASRFVLMNTEEHDTGRDGGEMVLSMADRWIWAKFQQTLVEFEKAL
EDYRFDIAAQTVYEFTWNQFCDWYLELTKPVLNNDASTEVEKRGTRHTLINVLESLLRLL
HPLMPFITDTIWQRVVPLSALKVEEGASIMVQAFPEVDAAKQDDKVLADIEWVKKFIVGI
RNIRGEMDISPNKPLNALLKNVSDEDARRLDAAKAFLDKLSKLETVTILKDGEEAPASAT
ALVGEMEILIPMAGLIDKDAELARITKTMEKIEKDVSRTRGKLGNEKFVSNAPEAVIEKE
RAKLEEGEKALAKLKEQFETIKAL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaccttcgaaccgcagtccatcgagcagcaatgctacaagtcatgggaagag
gcgggtttatttaaagcttcaggtagcggcgacccttattgtattttgcttccgccacca
aacgttaccggtagccttcacatgggccatggtttccagcaaaccattatggacgcctta
acccgttatcaccgcatgaagggcgacaatacgctatggcaagtgggtactgaccacgcc
ggtattgctacccaaatggtggtagaacgccaacttaacgcacaaggcaagacgcgccac
gatttaggtcgcgaagacttcatcaaaaaagtgtgggaatggaaagagcacagcggcgga
acgatcaccggtcaaatgcgccgtctaggtacgtcacctgactggtctcgcgaagtgttc
accatggacgaagacctgtctaaagccgtaacggaagtgttcgttaaactacacgaagaa
ggccttatttaccgtggtaagcgtttggttaactgggatccagtgcttcacactgcagta
tctgatcttgaagtactgaacgaagaagaagacggtcacatgtggcacatgcgctatcca
cttgcagatggtagcggtgagctagtggttgcgacaacgcgccctgaaaccatgctaggt
gatacagcggttgcggtacacccagatgacgagcgctatcaagactttatcggcaaagaa
attaagctaccgattactggccgtttaattccggttatcgccgatgactatgtagaccaa
gaattcggtacaggctgcgttaaaattacgcctgctcacgacttcaacgactacgacatg
ggtaagcgtcataacttgcctatgatcaacattcttaccgacgatgcgaaaattaacgat
gatgcgcctgaagcgtatcgcggtttagatcgcttcgacgcccgtaagcagatcgtggcc
gatttagacgcacaaggcgcattggttaagattgagccgcacaagcttaaagtgccacgt
ggcgacagaactggcgcagttatcgaaccatacctaactgaccagtggtatgtagccgtt
gagtctcttgctaaacctgcgattgaagcggttgaaagcggcgaaattcgttttgtgcca
gagaactggaacaagacttactaccagtggatgcacaacatccaagactggtgtatttca
cgtcagctgtggtggggacaccgcattccggcgtggtacgacgaaaacggcaacgttttt
gttggccgcaccgaagaagaagtgcgtgaaaagcacggccttggcagtgacgtaacgctt
tcacaggacgacgatgtactggatacctggttctcaagtgcactatggccgttcgccacc
atgggttggccagaagaaacgcctgatctagaaaccttcgtgccgtcttcagtgctagta
accggctttgacatcattttcttctgggttgccagaatgatcatgatgaccaagaagttc
acgggcaaaattccgtttaaagacatctacattactggtcttatccgcgatgagagcggc
gataaaatgtcaaagtcgaagggcaacgtgcttgacccaatcgatttgattgacggtatt
gatattgagtcgctagtcactaaacgcaccgcgggcatgatgcagcctcagcttgctgag
aagattgccaagcgtacccgtaaacagttccctgatggtattcaggcctacggtacagac
gcattgcgctttacctttgcagccatggcgtcaaccagccgcgatattaactttgatatg
gcccgtgttgaaggctaccgcaatttctgtaacaagatttggaacgcatcgcgtttcgta
ttgatgaacacagaagagcacgataccggtcgtgacggcggcgaaatggtacttagcatg
gccgatcgctggatttgggctaagttccaacaaacgctggttgagtttgaaaaggcgctt
gaagactatcgtttcgacattgctgcgcaaaccgtttacgagttcacctggaaccagttc
tgcgactggtatctagagcttactaagcctgtgcttaacaatgacgccagcaccgaagtt
gaaaagcgcggtacacgtcatacgcttattaacgtacttgaaagcctgcttcgcttgttg
cacccactaatgccatttatcaccgacactatctggcagcgcgttgtgccactaagtgca
cttaaggtggaagagggcgcaagcattatggttcaggcattccctgaagttgatgcagcg
aaacaagacgacaaagtactagctgatatcgagtgggtgaagaagtttatcgtgggtatt
cgtaatatccgtggtgaaatggatatctcgccaaacaaaccacttaatgcgctacttaaa
aacgtaagcgacgaagacgcgcgtcgtcttgatgcggctaaggcattcctagataagctt
tctaagcttgaaaccgtaaccatattaaaagacggtgaagaagcgccagccagcgcaaca
gcacttgtgggtgagatggaaattcttatcccaatggcagggcttatcgacaaagacgca
gagcttgctcgtattactaaaaccatggagaaaatcgagaaagatgtatctcgtactcgc
ggcaaattgggtaacgagaagttcgtaagtaatgcgccagaagcggtaattgaaaaggaa
cgcgctaagttggaagagggtgaaaaagccctagccaaacttaaagagcagttcgagacc
attaaagcgctttaa
DBGET
integrated database retrieval system
