Alteromonas mediterranea DE1: amad1_16355
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Entry
amad1_16355 CDS
T02340
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_16355
Transporters [BR:
amaa02000
]
Other transporters
Pores ion channels [TC:
1
]
amad1_16355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AFV86756
LinkDB
All DBs
Position
3673652..3675802
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AA seq
716 aa
AA seq
DB search
MFTNPAEDSLNLLMLNSKIPFLFSLVGLSVNAAAQSDSTLTQSAHDELEHIEVKRHFQPY
RGNVPLIDTPQATDRITADTLANEGITRFIDALDFAPTIVRQNNSGGMFDSFAIRGFSGD
ENNPSGYLINGFNVRGYSGNRSTVNVQTIEVMKGPGSVLYGQGEPGGTINIITKKPQFEE
QGYVQATVGNFDKKHVEFDYTNGISSDMAYRVNGSYENSDTYRDNVFFKNLNLNPSFIWN
LSDHTSLSYQMEILDQEKPLDRGVFILNNNFDAVDAEDFYGDIRDGAHEVKAFGHQLVLN
HNWHLLSGFAYRDSSFEGQSSDTELSEGRQILYTDPSVLSRQRRTRDYQAQDLSLRFELS
GVVDVAGFVNNVLFGLDYYNYHIDTDYRRWRTAWGAGDTTYSIDPENPDYTIFRPEVTPT
TLTAEKQKGLGFYAQDVIELTDATKLLVGFRVDKFEQDIFNKLSEEGQEQDQTEVTPRFG
FVYEINHAVSLYTSYAEGFRPNPGLDSDRNAFDPEETTSFEVGAKWENVADMFSGSIAIF
DAAKTNMLTAEPNTGFSATLGEVESQGIEFQLTTDLTSDIRLDMAYAYTDAKTAKAVNDL
DFGVPIPKGSRLINIAKHSGYISLNHFTRVFEKEAFFGVTMRYVGDRLGQTTDPTFILPS
YTLVNLAGSVNISDALSMRFDVNNLFDRDYFENSYHQLWIMPGSPTNYTVSVRYQF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaaccctgctgaagactcgttaaaccttcttatgcttaactctaaaataccg
tttttattttcgttagttggactatcggtgaatgccgctgcgcaaagtgatagtactcta
actcaaagtgctcacgatgaactagagcacatcgaagtgaaaagacactttcagccttat
cgtggtaacgtaccgcttatcgacacgccgcaagcaactgaccgaattaccgccgataca
ttagcaaatgaagggatcacacgcttcatcgatgcactggattttgcgccgactatcgta
aggcaaaacaactcgggcggtatgttcgatagctttgctattcgtggcttttctggcgat
gaaaacaatccgtcggggtatctgataaacggctttaacgtacgtggctacagcggcaat
agaagtacggttaacgttcaaactattgaagtaatgaaagggccaggctctgtcctttat
gggcaaggcgagcctggcggtaccatcaacatcatcaccaaaaaaccgcagtttgaagag
caaggctacgttcaagccaccgtcggtaattttgataagaagcacgtagagttcgattat
acgaacggcattagttcagatatggcgtatcgcgttaacggttcgtacgaaaactctgat
acttatcgcgataacgtgtttttcaagaatttaaaccttaacccttcatttatttggaac
ctctctgatcacaccagcttaagttatcagatggaaatcttagatcaggaaaagcctctt
gatcgcggtgtatttatcttaaataacaactttgacgctgtagatgccgaagacttttac
ggtgatatcagagacggtgcccatgaagttaaagcctttggacatcagctagtgttaaat
cacaactggcatttactcagtggcttcgcctatagagactcttcttttgaagggcagtct
tcagatactgaactatcggaaggtcgtcagattttgtataccgacccatctgtactttca
aggcagcgacgaacccgcgactatcaagcgcaagacttatcgctacgctttgaattaagt
ggcgtggtggatgtggcaggctttgtaaacaacgtcttatttggtttggactactacaac
taccacatagatacagactatcgtcgttggcgcacggcgtggggcgcgggtgataccacg
tatagtatcgaccctgaaaacccagactacactatttttagacctgaggtgacgcccact
acactcaccgccgaaaagcaaaaagggttaggattttatgcacaagacgttatagaactt
accgatgccaccaagcttttagtcggctttcgtgtggacaagttcgagcaagacattttt
aataagctgagcgaagaagggcaagaacaagaccaaacggaagtgacgccacgcttcggt
tttgtgtatgaaatcaatcacgctgtaagtctatacacgagctatgcagaaggtttcaga
cccaatccagggcttgattcagaccgcaacgcctttgaccctgaagagaccacctctttt
gaggtaggtgcgaagtgggaaaacgttgctgatatgttctcaggcagcattgcgattttt
gatgccgcaaagaccaatatgctaaccgctgaacctaacactggcttttcagcgacgctc
ggtgaagttgaaagccaagggattgagtttcaattaacgactgaccttacttcagacatt
cgccttgatatggcctatgcgtataccgacgctaagaccgcgaaagcagtgaatgactta
gattttggcgtgcctattccaaaagggtcgcgcttaatcaatattgccaagcattcgggt
tatatctcgcttaaccatttcacccgcgtatttgaaaaagaagcgttctttggtgtgacc
atgcgttacgtgggtgaccgcttaggacaaaccaccgatccaacattcattttgccgtct
tacacccttgtgaaccttgcagggtcggtgaatattagcgatgcgctttctatgaggttt
gacgtgaacaatctgttcgacagggattactttgagaactcataccaccagctttggatc
atgccgggttcaccgactaactatacggtaagcgttaggtatcagttctag
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