Alteromonas mediterranea DE1: amad1_16555
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Entry
amad1_16555 CDS
T02340
Name
(GenBank) TonB-dependent receptor, plug
KO
K02014
iron complex outermembrane recepter protein
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_16555
Transporters [BR:
amaa02000
]
Other transporters
Pores ion channels [TC:
1
]
amad1_16555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
AFV86794
LinkDB
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Position
3728668..3731178
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AA seq
836 aa
AA seq
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MTSSRCVKKHLLAFSICTALSLNTAAIAAAQESISVELEPAPLASALNQLSFKSGIVIIA
PGRLVNNIKAPALNGNYEIDEALEKLLFNSGLEAVKQTNGAFVIKKRGPQMSLTPKDTAV
NGAPIDEIVVSATKRDTNLMDVSAAVSVLNTQQIQDAGVTDFKGLVDALPGISINSAFGG
ANNSFITIRGIGGADDYKPNGNPSVALHVDGIYQTSNAYLGMPLFDLERIEVLKGPQGTL
YGRNTTAGVINAITKRPTDEFEGYASVEYGSYEYTQGEAAFGGSVSDNLKVRIATKFEQG
GGYMDGKGAGLFAGYVPEGFEGVIPAVTDPGERDGFGDKDLFAFRATGVYTFQANTDLTL
RYFMSSDNGDTLQYDRIALENETGSGISRNAGENDDPYAFYADEYYRHTIDIEGVNGELA
HQIDTDLNVNVLFGYQESERNMGGNGDGTSFPRYKYAFDETLDQSSLEIRFSDSQGGDID
WIAGVFYVSDSVDFVSDWTSFAVRSQYTSPYSQTRNSFATFANVDWFVNNDLKLSAGVRY
TQDTAKFSGYNQDLDPWGTSIYEEVFNSPGLFSWDRDFDDNNVSGKLTAQYYLSDNLNIF
ASIGNGYRAGGFDGTSIFSLEETEPFDSETVDSFELGLRYTDESLSASVDLFAYDFEEMQ
ATTRLSNDTNGRTNVGAAEVRGAEASFNAQLLNNGEQQLTFNSSVTYLDTEITEFSSNRV
DDVQNTVGDPLPGSPELSYSISLNHSIFVATNRLLSTRLTYTYHDEETNRLNAGAGNTVP
DYGLLNINMDLELGNGFTAFAYGRNITDEEYFLELNAGARLVGAPATYGVGVRTTF
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtcgcgttgtgtaaagaaacacttgttagctttttccatttgtacagctttg
tcactaaataccgctgcaattgcggctgcccaagaaagcataagcgttgaacttgagcca
gctcctttggcatcggcattaaaccaactttcattcaagtcgggcattgtgatcatcgca
cctgggcgactggtcaataatattaaagctcctgcgctaaatgggaactatgaaatagat
gaagcgcttgaaaaattgcttttcaattctgggttagaggccgtcaagcaaacgaatggg
gcgtttgtaataaagaaacgtgggccccagatgtctcttaccccaaaggacactgctgtc
aatggagcacctatcgacgaaatagtagtttcagctacaaaacgtgacaccaacctaatg
gatgtatcggcggctgtttctgtcttgaatacacagcagattcaagatgcgggggtcact
gatttcaaaggattggtagatgcactgccgggcatatcaattaactctgcatttggcgga
gccaacaatagtttcattacaattcgtggtattggtggggctgatgactacaaaccaaat
ggcaacccctctgtcgcattacatgttgatggtatctaccaaacgtctaatgcttatctt
ggcatgcctttgttcgacttagagcgaattgaagtcctcaagggccctcaaggaacactt
tacggacgtaatacaacagcaggagtcattaacgccatcacaaagcgtcccacagacgaa
ttcgaaggctatgccagcgtagagtatggaagttacgagtacacgcagggtgaagctgca
tttggcggaagcgtttctgataatttaaaggtacgtatcgctacgaaatttgaacaaggt
ggtggttacatggacggcaaaggcgcgggcctgttcgctggttatgtgccagaaggtttt
gagggggtaattccggccgtaaccgatccgggagagcgagacgggtttggtgataaagac
ctatttgcctttcgtgcaaccggggtttataccttccaggccaatactgacttaactttg
cgctactttatgagctctgataatggcgacacacttcaatacgatcgtatcgctttggaa
aatgagacaggctctggtataagcagaaatgcaggcgaaaacgacgacccatatgcgttt
tacgcggatgagtactatagacacactatagatatcgaaggtgtaaacggagaattagct
catcaaatagacactgatttgaacgtaaacgtgctatttggctaccaagaaagtgagcgt
aatatggggggaaatggtgacggaacctcatttcctcgctacaaatatgcatttgatgaa
acacttgaccagtcctctttagaaattcgcttcagtgatagtcaaggaggagacattgat
tggatcgcaggtgtcttctatgtcagcgactcggtggacttcgtaagcgattggacaagc
ttcgcagttcgctcccagtacacttctccgtatagtcagactcgaaacagctttgctacg
tttgccaacgttgattggtttgtaaacaacgacctgaaattatctgcgggcgttcgttat
actcaagatactgctaagttttcaggctacaaccaagacttagacccttggggaacttct
atatatgaggaagtattcaactcccctggcctgttttcttgggacagagattttgacgac
aataatgtctcaggtaagctaaccgcccaatactacctttctgataacctgaatattttt
gcctctattggcaacggatacagagcaggggggtttgatggtacatcaatattctcttta
gaagagactgagccatttgactctgaaaccgtagattcatttgaactggggttgcgttat
accgacgagagcttgagtgctagcgtcgacttatttgcttacgattttgaagaaatgcaa
gcaactactcgactttcaaatgacaccaatggacgaacaaatgttggagcggctgaagtt
cgtggtgcagaagcttccttcaacgcccagctgttaaacaatggcgaacaacaattaacg
ttcaattcatctgttacctatctcgatacagaaattacggagttttcatctaaccgtgtc
gatgatgtgcaaaatacagttggagacccgttacctggctcacccgagctttcatattca
atctcgctcaatcatagcattttcgttgcaactaaccggttactttctactcgtctgacc
tatacctaccacgacgaagaaactaaccgattgaatgcaggtgctggcaatacggtgcct
gattacggcttgcttaatatcaatatggaccttgagttgggtaacgggtttaccgcattt
gcatatggtcgaaacattactgatgaagaatattttctagaactcaatgcaggtgctcgt
ctcgttggtgctccagcaacatacggcgtaggcgttcgcactaccttctag
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