Alteromonas mediterranea DE1: amad1_17470
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Entry
amad1_17470 CDS
T02340
Name
(GenBank) putative DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa03030
DNA replication
amaa03430
Mismatch repair
amaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
amad1_17470
03430 Mismatch repair
amad1_17470
03440 Homologous recombination
amad1_17470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaa03032
]
amad1_17470
03400 DNA repair and recombination proteins [BR:
amaa03400
]
amad1_17470
Enzymes [BR:
amaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
amad1_17470
DNA replication proteins [BR:
amaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
amad1_17470
DNA repair and recombination proteins [BR:
amaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
amad1_17470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFV86973
LinkDB
All DBs
Position
complement(3940080..3940760)
Genome browser
AA seq
226 aa
AA seq
DB search
MIKQFIQACASVFFDKNRFKAKLRERYVGKTSFAAIDLELTSLQPSKTQITSLGYVEGKG
MRISLASSGYHVINTRADLGQSPVIHGLTQDILERGEELDEALRHLLPLLKRNILIFHNA
KLDLMALDRAFKQNNLQTVEVIYIDTLQLALYQLNKQHQVLPNNSATLTVCRQRLDLPAF
PAHNALDDALATLQLFFAQLNELGVTGEDSLKALLHTKAVGQYQLG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcagtttatacaagcgtgcgcctcagtgtttttcgataaaaacaggtttaaa
gcaaagcttcgagaacgctatgtaggtaagacttcatttgccgctatcgatttagaactt
acctccctgcagccgtctaaaacacaaataacctcattgggttatgtggaaggtaagggg
atgcgaatttctcttgcatcaagcggatatcatgtaattaatacacgtgccgacttaggg
caaagcccggtcattcatggtttaacgcaagacatattagagagaggagaggagcttgac
gaagcactgcgtcacttactgccactactaaagcgtaatattctgatatttcataacgct
aaacttgacctaatggcacttgaccgggcgttcaagcagaataatttacaaacagtagag
gtgatttacattgataccctacaactggcgctatatcagttaaacaaacaacatcaggtt
cttcctaataatagcgctacgcttacggtgtgtcggcagcgcttagacttacccgccttt
cccgcccacaatgcattagacgatgcgttagccacgttacagttattttttgcccaacta
aacgaattaggggttaccggcgaagactcattaaaggcattgcttcataccaaggctgtg
ggtcaatatcaattaggctga
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