Alteromonas mediterranea DE1: amad1_19095
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Entry
amad1_19095 CDS
T02340
Name
(GenBank) putative TonB-dependent receptor protein
KO
K02014
iron complex outermembrane recepter protein
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amaa02000
]
amad1_19095
Transporters [BR:
amaa02000
]
Other transporters
Pores ion channels [TC:
1
]
amad1_19095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AFV87294
LinkDB
All DBs
Position
complement(4325732..4327801)
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AA seq
689 aa
AA seq
DB search
MRLPSLFPMSLFTASLLTTMAAAQEANEIERIETTSSRIQGQITATGYAVSSISEETLSM
LSFQHIQESLNYIAGAGVQRGNGQEYLPALRSPVLTGAGACGGILAAEDGIPLRAAGFCN
INELFEAHGEVAERIDVIKGPASALYGSNAIHGVINVITPDTTQGTGQLALDYGSYGFHR
AKLQQGKDFGSSGVGIAASLTRDTGYRDDEGVDQEKVSLRHRIEWDSTVITSGLTYTHLD
QETAGYIEGFESYKSTELARSNPNPEAFRNAKSLRIWSKFNTSFDGGHGLSITPYLRNQD
MRFRMHFLPGKPLEENAQKGVGVLSQFNYIVNDYVSLDLGIDAEYTEGELVQSQQGATEG
SAFLVETIPSGKHYDYDVDAALIAPFFALNWQHEKWDVSLGGRFESMQYDYTNNMNVGRV
REDGTQCGFGGCRYSRPADSSNDFDSFSPKLSLRYQLNGSTQLFGGLARGYRAPQATELY
RLQRAQEVTDLDSVTADNIEVGITGTTDRGSYTLSFYSLEKDNVIYRDSNFFNVSNGETW
HRGVELSFNQKISDVLRVDFAGTYARHTYEHSQITGELDIKGNDMDTAPKVQLNTRLNYD
VTRNIQAQIEWQHVASYYTDAENLNEYDGHDLVHARVRFNVNNDITLHARINNVFDTKYA
ERADFTSFTGPRYFPGRPRNFMLSATFAL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaccctctttgtttcctatgtctttgtttaccgcatcgcttttaacgacaatg
gcagctgcacaggaagccaatgaaatagagagaatagagaccacatcttcacgaattcaa
ggccagataacagcaacgggctatgcggtatcatctatttcagaagagacgctctcaatg
ctttcttttcagcatatacaagagtcgcttaattacattgcgggcgccggtgttcaaaga
ggaaatggacaggagtatttgcctgcgttgcgctcaccggttctcacaggtgcaggggca
tgcggcggcatactggccgctgaagacggcataccattgcgcgctgccggcttttgcaac
attaatgagctgtttgaagcgcatggcgaggttgcagagcgtatcgatgtaattaaaggc
cctgcgtctgcattgtatggctctaatgctatccatggggttatcaacgtaataacgcct
gacactacgcaaggcactggtcagctcgctttggattacggctcatatggttttcaccgc
gctaaacttcaacaaggcaaagactttggcagcagtggcgtgggtattgctgcaagctta
acccgtgacactggctatcgagatgacgaaggtgtcgaccaagaaaaagtctcgttgcgc
caccgtattgagtgggacagcacggtgataaccagcggcctaacctatacacacttagac
caagaaacagcaggttatatagaaggttttgaaagctataaaagtaccgagcttgccaga
agtaacccaaatcccgaagcgtttcgcaatgcaaaaagcttaaggatatggagtaagttc
aatacgtcctttgatggtggacatggattatcaattaccccttacctacgcaatcaagat
atgcgttttcgcatgcactttctacctggcaaaccccttgaagaaaacgcacagaagggc
gtaggggtgctgtcgcagtttaattatatcgttaacgattacgtttccttagatttaggc
atagatgccgaatacaccgaaggcgagttagtgcagtctcaacaaggcgctaccgaaggt
tctgcttttttagttgaaaccataccgtctggtaagcactacgattacgatgtagatgca
gcgttaattgcgccgtttttcgctttaaactggcaacacgaaaaatgggatgtttcttta
ggcgggcgctttgaatcgatgcaatacgactacaccaacaatatgaacgtagggcgtgtg
cgagaagatggtacccaatgtggttttggcggttgtcgttattctcgcccagccgatagc
agtaacgactttgacagttttagccctaagctttctttgcgctatcagcttaacgggtct
acgcaattattcggcggccttgcgcggggttaccgtgcgccacaagccactgaattgtac
cgtttacagcgggctcaagaagtaacagatttagattcagtcaccgcagataatatcgaa
gttggtattacaggtaccactgaccggggcagctataccctttctttctatagccttgaa
aaagataacgtgatttatagagacagcaatttttttaacgtgagcaatggagagacgtgg
catagaggcgtagagctttcgtttaatcaaaaaattagcgatgttttacgcgtagacttc
gccggtacttacgcaaggcatacctatgagcacagccaaatcactggtgagctagatatt
aaaggcaacgatatggataccgcgcccaaggtgcagttaaacacccgcttaaactatgac
gtcacaaggaatattcaggcgcaaatagaatggcagcatgtggcaagctactatactgac
gctgaaaatttaaacgaatatgatggccatgacttagtgcatgcgcgagtgcgttttaac
gttaataatgacattacgcttcacgcgcgtatcaacaacgtattcgataccaagtacgct
gagcgtgctgactttactagttttacaggccctcgttacttccctggtcgccctcgaaac
ttcatgctaagcgctactttcgcactgtaa
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