Alteromonas mediterranea DE1: amad1_19105
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Entry
amad1_19105 CDS
T02340
Name
(GenBank) LysR family transcriptional regulator
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amaa03000
]
amad1_19105
Transcription factors [BR:
amaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
amad1_19105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
DUF3798
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AFV87296
LinkDB
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Position
4328733..4329617
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AA seq
294 aa
AA seq
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MNTKLLRSLQVFISVTDSGSMSVAARELHMTVSAISQQLRKLEHDIGLSLFNRNTRSLSL
TEAGRIYYETSKQMLETAELAQQKIESLQDDPTGKINIIAPEGFGGGLLSEPLKKLCEEF
PKITISLTVTDEPKDIIASSADLVLCFAPVSDTNFSSLELATWKRILCVSARHPLANEAL
SSPAQLNSHAYITHRHIEDYVMQHDNEGEYELDTQRIDVNSMQTLIKLTQDGVGYAILPE
PEVRHLLKSGEMKQLFTEWELPDYTVYAVTPKRELVPAKISAAITCLQDLFAQI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaaattacttcgctccctacaggtttttatttcggttacagacagtggaagc
atgagtgtcgcagcccgagaacttcacatgacagtgtctgcgattagccaacagctgaga
aagctagagcacgacatcggtcttagccttttcaatcgaaatacgcgaagcttgagctta
acagaagcaggacgcatctattacgaaaccagtaaacaaatgctggaaaccgcagagcta
gcacagcaaaaaatagaaagtttgcaagatgaccctaccggtaagataaatatcattgcc
cctgaagggtttggcggcggtttactcagtgagccgcttaaaaagctatgtgaagagttt
cccaaaattactatctcacttacggtaaccgacgaaccgaaagatattattgcttcgagt
gcagacttagttctctgctttgcgcctgtttcagatactaacttcagcagtttagaactt
gctacctggaagcgcattttatgcgtatcggcacgacaccctctagcgaatgaagccctg
agttctccggcacagttaaatagtcacgcttatatcacacatcgccatattgaagattat
gttatgcaacatgataacgaaggtgaatatgaattggatacccagcgtatagacgtaaac
tcgatgcagacactgattaagctaacgcaagacggggtaggttacgcgatattaccagaa
ccggaagtaagacacttactcaaatcaggtgaaatgaagcagcttttcacagaatgggaa
ttgcctgactataccgtttatgcggttacccctaagcgagagttggtacccgccaaaatc
agtgcagcaatcacttgcttgcaagatttattcgcccaaatatag
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