Alteromonas mediterranea DE1: amad1_19895
Help
Entry
amad1_19895 CDS
T02340
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00190
Oxidative phosphorylation
amaa00860
Porphyrin metabolism
amaa01100
Metabolic pathways
amaa01110
Biosynthesis of secondary metabolites
amaa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
amad1_19895
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
amad1_19895
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amaa01006
]
amad1_19895
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
amaa03029
]
amad1_19895
Enzymes [BR:
amaa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
amad1_19895
Prenyltransferases [BR:
amaa01006
]
Compound prenylation
Protoheme farnesyltransferase
amad1_19895
Mitochondrial biogenesis [BR:
amaa03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
amad1_19895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
MTIP_N
Motif
Other DBs
NCBI-ProteinID:
AFV87452
LinkDB
All DBs
Position
complement(4509316..4510233)
Genome browser
AA seq
305 aa
AA seq
DB search
MAKSLPLQARASRQYQQVTWRDYYEMTKPNVVMLLLLTALVGMCLATPTWVSAEVLICGL
LGIGMLSASAAVINHVVDHKIDSVMARTFNRPVAKGKVSINNALWFAGILGVVGFAVLAL
FVNMITAWLTLASLVGYAFIYTMYLKRATPQNIVIGGLAGAAPPLLGWTAVTGEIHAHAL
LLVLIIFTWTPPHFWALAIHREKDYAKAKVPMLPVTHGVSFTKTSVLLYTVLLGLVCLLP
YLTGMSDLIYLIGASILNIGFLYYALKLKFDADSQTAMKTFRFSIIHLMVLFVVLLLDHY
IPLSL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcacttccattacaggcacgcgcttctcgccaataccagcaggttacttgg
cgcgattattatgaaatgactaagccgaatgtggtgatgttgctgctgttaactgcgcta
gtgggcatgtgcttagccacgcctacttgggtatcggctgaggttttaatttgtggctta
ctcggtataggcatgttatcagcgtcagctgcggtgattaatcatgttgtcgatcacaaa
atagatagcgtgatggcgcgtacctttaaccgtcccgtggcgaaaggtaaagtgagtata
aataatgccctttggtttgcaggaatactcggtgtagtgggctttgcggtcctcgctctt
tttgtaaacatgataacggcatggctcacgctggctagcttagtcggctacgccttcatc
tacaccatgtacttaaagcgtgcaacgcctcaaaatatcgttattggcggcctagcaggc
gcagcccctccgcttttaggctggactgcggtaacgggcgagattcatgcccacgcgctc
ttgttggtacttatcatctttacatggacgcccccgcatttttgggcgcttgccatccat
agagaaaaagactacgcgaaagcgaaagtgcctatgctgcctgttacccatggggtttct
tttaccaaaacatccgtgttgctatacacagtattgttagggcttgtgtgcttgctacct
tacttgactggcatgagcgatcttatttatctaattggcgcgagtatattgaatattggc
tttttatattacgcgctaaagctgaagttcgacgcagattcacaaaccgcaatgaaaact
tttaggttttcaattattcatctcatggtattgtttgtagtattactcttagatcactac
ataccactgagtttatga
DBGET
integrated database retrieval system
