Alteromonas marina: ACI7YQ_00965
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Entry
ACI7YQ_00965 CDS
T11015
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amab Alteromonas marina
Pathway
amab03420
Nucleotide excision repair
amab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACI7YQ_00965 (uvrD)
03430 Mismatch repair
ACI7YQ_00965 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amab03400
]
ACI7YQ_00965 (uvrD)
Enzymes [BR:
amab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI7YQ_00965 (uvrD)
DNA repair and recombination proteins [BR:
amab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACI7YQ_00965 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACI7YQ_00965 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
XLP07458
LinkDB
All DBs
Position
complement(215054..217225)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEANLPENFQIIDSDDQY
RLIRRILKAMNLDEKHWAPRQIQWYINGNKDEGLRPQHIETHGDHIQKTMREVYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPEVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGG
NNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNEPNTIRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDAQGELISVYAGFNELDEARFIVSKIKNWLNQGNALSDTAILYRNNAQ
SRVLEEALLHEGLAYRIYGGLRFFERQEIKDALGYMRMVSHPHDDAAFERVVNTPSRGIG
EKTLSQVRETARAHNCSMWQACQLLINEGGFKGRALNAMQSFVLLITELEQSTLDESLDQ
QADKAIKQSGLYAMYQAERGEKAQARLENLEELVTACKTFIVPDEAEEMTPLAAFLAHAS
LEAGETQADKDQDAVQMMTIHTAKGLEFPLVFLAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIREMPADCVEEVRLKSTISRPVHNRFS
QATSHASFEETGFSLGERVVHRKFGEGIVLNYEGSGEHGRVQVNFDEFGSKWLVLAYAKL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctcgactgctagacgagcttaacgacaaacaacgtgaagctgtagcagcc
ccattgtctaacgctttagtacttgccggcgcaggtagtggtaaaacccgcgtattagtg
catcgtattgcgtggttgatggaagtcgaaaacatcgcgcctttctcgatattagcagta
acctttacgaataaagcggccaaagaaatgcgcggccgtatcgaatcgcttatggggcgc
agtctacacaatatgtggattggtaccttccacggactagcacatcgcttactacgtgcc
catcacgcagaggcaaatcttccggaaaatttccaaattatcgattctgacgaccagtac
cgcttaattcgtcgaattcttaaagccatgaacctagatgaaaaacattgggctccccgc
caaatccaatggtatatcaatggcaataaggacgagggtttacgccctcagcacatagaa
acccatggcgatcatatccaaaaaaccatgcgtgaagtatatgctgcatatcaggatgcc
tgcgaccgttctggcttagttgactttgccgagttgctattacgggctcatgaactgtgg
gctaaaaatccagaagtactcgctcactaccaacgccgtttccgcgcagtgctggtcgac
gaatttcaagataccaacaatattcaatacgcttggcttcgcatgctttgtagtggcggt
aataacaacattatgattgttggagacgacgaccaatctatctatggctggcgtggtgca
aatgtcgataatattcagcacttcctcaaagattttaatgaacctaataccattcgtctt
gaacagaactatcgttcaaccggcaacatcctgaaagcggcgaacacggttatcgacaat
aacacgggccgtttagggaaagagctttggaccgaagacgctcagggcgagctaatttct
gtatatgcaggttttaacgaactagacgaagcgcgatttattgtttcgaagattaaaaac
tggcttaaccaaggcaatgccctaagcgataccgcaattctttacagaaacaacgctcag
tcccgagttctagaagaagcgttactccacgagggattagcctaccggatctacggcggc
ttgcgcttcttcgaacgtcaagaaattaaagatgccctaggctacatgcgcatggtaagc
cacccgcatgacgacgccgcatttgaacgtgtggtaaataccccaagtcgggggattggt
gaaaaaaccctatcacaggtgcgcgaaacagctcgcgcgcacaactgctctatgtggcag
gcctgccaactgcttatcaacgaaggcgggttcaaaggtcgagcattgaatgcaatgcaa
agcttcgtgctacttattacagagcttgaacaatcgaccttggatgaatcgcttgatcaa
caagcggataaagccataaaacaatcgggtctttacgcgatgtatcaagccgaacgtggt
gaaaaagcgcaagctcgattggaaaacttagaagaactggttaccgcatgtaaaaccttt
atcgtgcctgacgaagctgaggaaatgacgcctcttgcggcgtttttggctcacgcatct
ttagaagccggcgagacacaagcagacaaagatcaagatgccgtgcaaatgatgactatt
cacaccgcgaagggtttggaatttccactggtatttttggccggtgtggaggaaggcatg
ttccctagccaaatgaccaacgatgagcctggcagaatggaagaagaacgcaggctttgc
tatgttggaatgaccagggctatgcaaaagttgtatatcacttatgctgaaagtcgtcga
ttatatgggcaggacaagtatcacactgcctctcgatttattcgcgaaatgccagcagat
tgcgtcgaagaggtgagattaaagtcaacgatctcgcgcccggtacataaccgattcagc
caggctacctcacatgcgagttttgaagaaaccggatttagtttaggcgaacgcgttgta
caccgtaaattcggcgaaggtatagtgcttaattacgaaggtagtggtgagcacggccga
gttcaagtaaacttcgatgaatttggcagcaagtggctggtacttgcttacgcaaagctg
gagaaggcgtaa
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