Alteromonas marina: ACI7YQ_02760
Help
Entry
ACI7YQ_02760 CDS
T11015
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
amab Alteromonas marina
Pathway
amab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI7YQ_02760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amab03019
]
ACI7YQ_02760
03009 Ribosome biogenesis [BR:
amab03009
]
ACI7YQ_02760
Enzymes [BR:
amab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACI7YQ_02760
Messenger RNA biogenesis [BR:
amab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACI7YQ_02760
Ribosome biogenesis [BR:
amab03009
]
Prokaryotic type
rRNA helicases
ACI7YQ_02760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
HEM4
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XLP07792
LinkDB
All DBs
Position
complement(614442..616229)
Genome browser
AA seq
595 aa
AA seq
DB search
MTTTVDMTFKDLNLPEPILQALEKVGYEKPSPIQAESIPLLLKGHDLLGQAQTGTGKTAA
FALPMLANIDPEQSKPQLLVLAPTRELAIQVAEAFQVYASFSQKIRVLPVYGGQSYDNQI
RQLKRGVQVVVGTPGRIIDHIKRKTLDLSELKYLVLDEADEMLRMGFIDDVELILSHAPE
ERQTALFSATMPGPIKKITQRYLKDPKHVKIASKVSTASTIRQRYCQIAPHHKLEALTRI
MEVEVFDGMIIFVRTKTATVELADKLSARGYDVEPLNGDIPQAARERTVEKLKQGNIDIL
VATDVVARGLDVERVSHVINYDIPYDSESYVHRIGRTGRAGRQGDAILFISHREKRLLFS
IEKTTKQPIEAMPIPSISEINETRLSRFKQSVTEATQDDSIESLMPIVEMIKAENEASPE
VLMAALLKIAQGDEPLILKETDRPDINSKPPRDSRERGSRDGRDGRERKPKVPRGNRKPE
EGMQRFRIEVGHVHGAKPGNIVGAIANEANINSKHIGAIEIYDNFSTVDLPDGMPKETRD
TLSGTRVAGQRLNIREWSDTPPPKREGRGERPSRADKAPRGNREDRGSRERKRKN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactgtcgacatgacatttaaagacctcaatttaccagaacctatcttacaa
gccctcgaaaaagttggctatgagaaaccgtcacctattcaagcagagagtatacctctt
cttcttaaaggtcacgatttactcggtcaggcacagacagggacaggaaaaaccgctgcg
tttgccctgcccatgttggcaaatatcgatcctgagcaaagtaagccgcaattactggta
ttggccccaactcgtgaactagctattcaggttgcagaggcgtttcaggtttatgcgagc
tttagtcaaaaaattagagtacttccagtatacggcggccagtcgtacgataatcaaatt
cgtcagctaaaacgtggcgtacaagtggttgttggtacaccgggacgtattattgaccat
attaagcgcaaaacattagacttaagcgagcttaagtatcttgtgcttgacgaagctgac
gaaatgcttcgcatgggttttattgatgacgtagagcttattcttagccatgcgccagaa
gaacgccaaaccgcgttgttctctgcaaccatgcctggcccaatcaagaaaattacccag
cgttacttgaaagatcctaagcacgtaaaaattgcgtctaaggtaagtactgcaagcact
attcgccagcgctactgtcaaatcgcgccacatcacaaacttgaagcgttgactcgcatc
atggaagtggaagtgtttgacggtatgattattttcgtgcgtacgaaaaccgctacagtt
gaactggcagataaactgtcagcccgtggttacgatgtagagccgctaaacggtgatatt
cctcaggctgctcgcgagcgcacggttgaaaagcttaagcagggtaatatcgatattctt
gttgctactgacgtagtagctcgtggtcttgacgttgagcgtgtgagccacgttattaac
tatgatatcccgtatgatagtgagtcttacgttcaccgcatcggtcgtactggtcgtgct
ggacgtcaaggtgacgccatcttatttatctctcatcgcgaaaagcgcctgttgttctct
attgagaaaaccactaagcagcctattgaagcaatgccaattccttcaattagcgaaatc
aacgaaacacgcttaagtcgcttcaagcaatcggttaccgaagcaacacaagacgatagc
attgaatcgttaatgcctatcgttgagatgattaaagcagaaaacgaagcgtctcctgaa
gtgttaatggctgctttgcttaaaattgcgcaaggcgacgaaccgttaattcttaaagaa
actgatcgcccagacatcaacagcaagcctcctcgcgatagccgcgaaagaggcagccgt
gatggtcgtgatggtcgcgagagaaagccgaaagtaccacgcggaaaccgcaagccagaa
gaaggtatgcagcgcttccgcatcgaagtaggccatgttcacggtgctaagccaggtaac
attgttggcgcgattgcgaatgaagcgaatatcaactctaagcacattggtgctatcgag
atttatgataatttcagtactgtagaccttccagacggtatgcctaaagaaacacgcgat
accctttcgggcacgcgagtggcaggtcagcgtctaaatatccgcgaatggtctgacacg
cctccacctaaacgtgaaggacgtggcgaacgcccaagtcgtgcagataaagcacctcgt
ggtaatcgtgaagatcgcggcagccgtgagcgcaagcgtaagaactaa
DBGET
integrated database retrieval system
