Alteromonas marina: ACI7YQ_08280
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Entry
ACI7YQ_08280 CDS
T11015
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amab Alteromonas marina
Brite
KEGG Orthology (KO) [BR:
amab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amab03016
]
ACI7YQ_08280 (truB)
Enzymes [BR:
amab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACI7YQ_08280 (truB)
Transfer RNA biogenesis [BR:
amab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACI7YQ_08280 (truB)
Prokaryotic type
ACI7YQ_08280 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XLP08809
LinkDB
All DBs
Position
1898452..1899423
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AA seq
323 aa
AA seq
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MARRRKGREINGIVLLDKPLGGSSNQLLQKVRWLYKAAKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAQLGVRTTTSDADGEVVEEKPVDVSEEQVRDACLAFLGKSKQ
IPSMFSALKHQGKPLYHYARQGIEIEREPRDIEVYELDVLRIELPFVEMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLDKLIEIQESLEEGDFKALDELLIPM
DTAVSRLPFVTINDAERNRFDNGQSVKGECSEALCEGTAYRVYHGDDTSGIFLGVGEGVL
DPKDQGIPKQEVFVNPKRRVVYN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgtcgtaaaggccgtgagattaacggcatagtattgcttgataaaccgctt
ggtgggtcatctaatcaactgcttcaaaaagtgcgctggctttacaaagcggctaaagcc
gggcatacaggcgcacttgacccacttgccagtggcatgttgccgctgtgtttaggtgag
gccactaagttttctcagtttcttctggatgccgagaaaacctacgaagtaacggctcaa
ctgggcgtgcgcacaactacgtctgatgcagacggtgaagtggttgaagaaaagcctgtt
gatgtgagcgaagagcaagtgcgcgatgcgtgcttggcatttcttggtaagagcaaacaa
atcccgtccatgttttcagcgcttaaacatcaaggtaagccgctctatcactatgcccgt
caaggtatagaaatcgagcgtgaaccccgtgatattgaagtgtatgaattagatgtactg
cgcattgaactgccgtttgtagaaatgcgcattaagtgcagcaaaggcacttatattcgc
tccatcgtagatgatttaggtcagaaccttggctgcggtgcttacgtgactcgtttgcat
cgcactgaagtagcagactaccctacggataaaatggtatcgcttgataagttgattgaa
attcaggaatcactggaagaaggtgactttaaagcgcttgatgagttgcttattcctatg
gataccgccgtaagtcgtttgccatttgtgacgattaacgacgctgaaagaaaccgtttt
gataacggccaatctgtaaaaggcgagtgcagcgaagcactttgtgaaggcactgcttat
cgcgtttaccatggcgacgataccagtggtattttcttaggcgtaggagaaggggttctc
gaccctaaagaccaaggtatccctaaacaagaagtgtttgttaaccctaaacgccgggtc
gtgtacaactaa
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