Alteromonas marina: ACI7YQ_08935
Help
Entry
ACI7YQ_08935 CDS
T11015
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amab Alteromonas marina
Pathway
amab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI7YQ_08935 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amab03019
]
ACI7YQ_08935 (pnp)
03016 Transfer RNA biogenesis [BR:
amab03016
]
ACI7YQ_08935 (pnp)
Enzymes [BR:
amab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACI7YQ_08935 (pnp)
Messenger RNA biogenesis [BR:
amab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACI7YQ_08935 (pnp)
Transfer RNA biogenesis [BR:
amab03016
]
Prokaryotic type
tRNA degradation factors
ACI7YQ_08935 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
XLP08932
LinkDB
All DBs
Position
2048196..2050307
Genome browser
AA seq
703 aa
AA seq
DB search
MTPITKSFQYGQHTVTLETGVIARQATAAVLASMDDTSVLVTVVGKKEAKPDQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFKNEVQVVVTVMSAN
PDIPTDIISMIGTSAALAISGIPFNGPIGAARVGYSNGEYILNTRAEEQAESQLDLVVAG
TEGAVLMVESEADVLSEDTMLGAVMFGHEQLQTVVSAVNEFAAEVGTEKWDWAPEAENTA
LKDKVKALAEAEMTAAYQISDKLERKDAVTAATEKALEAILAEDEEQDKKEVLDLLHELE
SDVVRSRILSGAPRIDGREPAMIRALDVATGILPRTHGSALFTRGETQAIVAATLGTERD
AQMIDELQGKRDSRFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQAVMPSEEEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDDNFVVLSDI
LGDEDHLGDMDFKVAGTTDGITALQMDIKIEGITKEIMQIALKQAKEARLHILKVMDEAI
GGHREELSEFAPRIYTMKIDQDKIRDVIGKGGAMIRQITEESDTNIEIEDDGTIKIFATE
RAKADIAISKIEQVTAEIEVGKTYNGKITRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VTDYLKEGEMVDVKVMEIDRQNRVRLSIKELLEKPAPKSDDAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactaaatcatttcagtatggacagcatactgtaactctagagacgggt
gtaattgctcgtcaggcaacagctgcggttcttgcgagcatggacgatacgtctgtactg
gtaacagtagttggtaaaaaagaagccaagccagatcaagacttctttcctctaacagtt
aactaccaagaaaaagcatacgctgcgggtaaaatcccaggtggtttcttcaagcgtgaa
ggccgtccatctgaaggcgaaacattgactgcgcgtcttatcgaccgcccaattcgccca
ttattcccagaaggtttcaaaaacgaagtacaggttgttgttactgtaatgtctgctaac
ccagatatccctacagacatcatctctatgattggtacttcagcagcccttgctatctct
ggtattcctttcaacggcccaattggtgctgctcgtgtaggttatagcaacggtgaatac
attctaaatacacgcgcagaagagcaggctgaaagccagcttgaccttgttgttgcgggt
actgaaggtgcagtacttatggttgaatcagaagctgacgtgctttctgaagatactatg
ctaggtgcggtaatgttcggtcacgagcaacttcaaactgtggttagcgcagtaaatgaa
tttgctgctgaagttggcactgagaagtgggactgggcaccagaagcagaaaacactgca
ctaaaagacaaagttaaagcactagctgaagctgaaatgacagcggcttaccagatttct
gacaagttagagcgtaaagacgcggtaactgcagccactgaaaaggcattagaagctatc
cttgctgaagacgaagaacaagacaagaaagaagtactagaccttcttcacgaacttgag
tctgacgtagtacgttcacgcatcctttctggcgcgccacgtatcgacggtcgtgagcct
gcaatgattcgtgcgctagacgtagcaacgggcattcttcctcgtactcacggttctgca
ctatttacccgtggtgaaacacaggcaattgttgctgctactttaggtacagagcgtgat
gcacagatgattgacgagcttcaaggtaagcgcgacagccgtttcatgcttcactacaac
ttccctccatactgtgttggtgaaaccggtatgattggttcgcctaagcgtcgtgaaatt
ggtcacggtcgtctagcgaagcgtggtattcaagcagtaatgccaagtgaagaagaattc
ccgtacgtagtacgtgtggtttctgaaatcacagaatcaaacggttcatcttcaatggcg
tcggtatgtggtacttcactagcgcttatggatgcgggtgttccaattaaagcgtcggtt
gcgggtatcgcaatgggcctagttaagagtgacgacaactttgttgtactttcagacatc
cttggtgacgaagatcaccttggcgacatggactttaaagtagcgggtactaccgacggt
attactgcacttcaaatggacattaagattgaaggtattactaaagaaatcatgcaaatt
gcgcttaaacaagcaaaagaagcacgtttgcacattcttaaagtaatggacgaagcgatt
ggtggtcaccgtgaagagctaagtgaatttgctccacgcatttacacaatgaagattgac
caagacaagattcgtgacgttatcggtaaaggcggcgcaatgatccgtcaaattactgaa
gagtctgacactaacatcgagattgaagacgacggtactatcaaaatcttcgcgacagag
cgtgcgaaagcagacatcgctattagcaagattgagcaagtaacggctgaaattgaagtt
ggtaagacttacaacggtaagattacacgtattgtagacttcggtgcgtttgtagaagta
cttccaggtaaagaaggtcttgttcatatttcacaaatcgctcacgagcgtgtgaacaag
gttactgactaccttaaagaaggtgaaatggttgacgttaaggttatggaaatcgaccgc
cagaaccgtgtacgtttaagcattaaagagcttctagaaaagcctgcgcctaagtctgac
gacgcagagtaa
DBGET
integrated database retrieval system
