Alteromonas marina: ACI7YQ_14005
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Entry
ACI7YQ_14005 CDS
T11015
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amab Alteromonas marina
Pathway
amab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACI7YQ_14005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amab03019
]
ACI7YQ_14005
03400 DNA repair and recombination proteins [BR:
amab03400
]
ACI7YQ_14005
Enzymes [BR:
amab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACI7YQ_14005
Messenger RNA biogenesis [BR:
amab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACI7YQ_14005
DNA repair and recombination proteins [BR:
amab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACI7YQ_14005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
AAA_22
TniB
SWI2_SNF2
Epimerase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
XLP06244
LinkDB
All DBs
Position
3192792..3194783
Genome browser
AA seq
663 aa
AA seq
DB search
MYSDPIILQQLFGFSAFREGQKEAVDLLLSGHSTLAIFPTGSGKSLCYQYVATQLPHLTL
VVSPLLALMKDQLEFLHSKGIAAASIDSTLTPEENKQVMNDVRSGQCKVLMVSVERFKNE
RFRQFIESVRVSMLVIDEAHCISEWGHNFRPDYLKLPDYQKELNIPLVLLLTATATKKVK
MDMAARFDISPASIIQTGFYRPNLNLEVRPVLEPNKKQALLEEVKKQQGAGIVYVTLQNS
AGEVAQFLQQQGFTAKAYHAGLDSEVRQRIQQDFMNNKLQVVVATIAFGMGIDKSDIRFV
IHYDLPKSIENYSQEIGRGGRDGEVANCTVLANLDGLVTIENFVYGDTPDKSAIERVITD
IKSQAPVHLDTAKEIQPPDNSDNNVYQWETQINSLSSTSNIRQLPLKTLLVQLELANVIR
PLYAYFAEYKFRFISDKATILGLFSEERSRFLDAVFTHSNMKKVWGVVNFDSIYQHYGAE
RSRVVAALEYLHEYNHIELASRLITDVYRVNNEQLCSEDLADKLAQYFAENEHKEIERIA
ALVGFFELNTCLSYSLSAYFDDTKAPLKCGHCSVCQGKVAKLSYSTPIAKPDMTQVAEAI
SALQSHLEGKFEGPITESIYCRFLTGMTMPLFTRFKVKQVKGFGSCENCRYADVKAAVSS
VIA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtactctgaccccattattttacagcagttgtttggtttttcggcatttcgcgagggc
cagaaggaagcggtggatttgctgctaagtggtcattcaactctggcaatatttcctact
ggttcaggcaaatcactttgctatcagtacgttgctacgcaattgccgcatttaaccttg
gtggtgtcgccattattggcgctgatgaaagatcagctggagtttcttcatagcaaaggc
attgcagcagccagtatcgactccacgttaacacctgaggaaaacaagcaagtgatgaat
gatgtccgctctggtcaatgcaaagttttgatggtgtctgtggagcgttttaagaacgaa
cgttttagacagttcattgagtctgttagggtgagtatgttggttatcgatgaggcccac
tgcatctcggaatggggtcataattttcgccctgattacctgaagcttcctgattatcag
aaagagctcaatattcctctagtattattactcaccgctaccgctactaaaaaagtaaaa
atggatatggcggcacgttttgatatttctccagccagcattatccaaacggggttttat
cgtccgaaccttaatctagaggtacgccctgttcttgaacccaataaaaaacaagctttg
ctagaagaagttaagaaacagcaaggtgcgggcatagtttatgtcacactgcagaacagc
gccggggaagtagctcagtttctgcagcagcaagggtttactgcaaaggcctaccacgct
ggactcgatagtgaggtcaggcaacgtattcagcaagatttcatgaacaacaagcttcaa
gttgtggtggcgactattgccttcggcatgggtattgataaatcggatattcgctttgtt
attcactacgacctaccaaaatctatagaaaactatagtcaggaaattggcagaggcggg
cgagatggtgaggtagcaaactgcacggtattagcgaacctcgacggattggtcaccata
gaaaattttgtttatggagatacgcccgataaaagcgcaattgagcgcgtaattaccgac
attaaatcacaagctccggttcatctagatactgcaaaagaaattcaacctccagataac
agcgacaacaatgtttaccagtgggaaacccaaattaacagcttatcgagcacaagcaat
attcgtcagcttccccttaaaacccttttagtgcagcttgaactcgcaaatgttattcga
ccgttgtacgcctactttgcagaatacaagttccggttcatttctgacaaagccaccata
ctcggtttattttcagaagagcgttcgcgctttttagatgcggtattcacgcactccaac
atgaaaaaggtatggggcgttgttaattttgacagtatttatcagcattacggtgcagag
cgttctagagtggttgcggcattggagtatttgcatgaatataatcacatcgagcttgca
tcacgcttaattaccgatgtttatcgcgttaacaacgaacaactatgctcggaagactta
gcagataagttagcgcagtattttgctgaaaacgaacacaaggaaatagagcgtatagcg
gcgctggtaggcttcttcgaactcaacacctgtttaagctatagcctatcggcgtatttt
gacgataccaaagcgcctttaaaatgtggccactgcagtgtgtgccaaggtaaggtggct
aagcttagttactcaacccctattgccaagccagatatgacacaagtagctgaagctatc
tcagcactacaatctcatttagaaggaaagtttgaaggccctattaccgaatccatctat
tgccgttttcttactggcatgacgatgcctttatttacgcgctttaaagtaaagcaagtg
aaaggcttcgggagctgtgaaaactgccgctatgcagatgtaaaagcggcggtatcttct
gtaatagcgtaa
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