Alteromonas marina: ACI7YQ_16860
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Entry
ACI7YQ_16860 CDS
T11015
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
amab Alteromonas marina
Pathway
amab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACI7YQ_16860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amab03021
]
ACI7YQ_16860
03400 DNA repair and recombination proteins [BR:
amab03400
]
ACI7YQ_16860
Enzymes [BR:
amab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACI7YQ_16860
Transcription machinery [BR:
amab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACI7YQ_16860
DNA repair and recombination proteins [BR:
amab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACI7YQ_16860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
XLP09205
LinkDB
All DBs
Position
complement(3891735..3892724)
Genome browser
AA seq
329 aa
AA seq
DB search
MVGSVTEFLKPRLVEIENVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKTEATLTLVKSGAGPVVAGDIQHDGD
VEITNPEHLICTLTGEAEISMRIKVEMGRGYVPASTRRSSEEDDRPIGRLLVDASYSPVE
RIAYTVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRSATILAEQLDAFVDLRDVSEPV
AKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIAEKD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
attgtgggttctgtgactgaattcctaaaaccgagattagttgagatcgaaaacgtttct
cctactcgtgccaaagtaactttggaaccactagagcgcggctttggccacactctaggt
aacgccctacgtcgtattttactgtcatctatgccaggatgtgcagttaccgaagtagaa
attgatggcgttcttcacgagtacagcaccaaagaaggtgtacaggaagacgttatcgaa
atcttgctaaatcttaaaggtttagcggttcgccttgaaggtaaaactgaggcaacccta
actctagtgaaatctggcgctggccctgttgttgctggtgatattcagcatgatggcgac
gtagaaattacaaaccctgagcacttaatttgtactttaactggcgaagctgaaatcagc
atgcgtattaaagtagaaatgggccgtggttatgtaccagcttctacccgtcgctcctct
gaagaagatgatcgtccaattggtcgtttgttagttgacgcttcatacagcccagttgaa
cgtattgcttacactgttgagtctgcgcgtgttgaacaacgcacagaccttgacaagcta
atcatcgacatggaaacgaacggtactttggatcctgaagaagcgatccgccgttctgca
accatcctagctgaacagcttgatgcattcgtagatctacgtgatgtatctgagccagta
gcgaaggaagagaagccagaattcgatccgattctgcttcgtccagtagatgacctagag
ctaacagtacgttctgcaaactgtttgaaagcagaagctatccagtacattggtgacctg
gtacagcgcactgaggttgagctacttaaaacgcctaaccttggtaagaaatcgctaact
gaaatcaaagatgttctagcatctcgtggtctttctctaggtatgcgcctagaaaactgg
ccgccagagagcatcgctgaaaaagattaa
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