KEGG   Alteromonas marina: ACI7YQ_17690
Entry
ACI7YQ_17690      CDS       T11015                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
amab  Alteromonas marina
Brite
KEGG Orthology (KO) [BR:amab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amab03400]
    ACI7YQ_17690
Enzymes [BR:amab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACI7YQ_17690
    5.6.2.6  RNA 3'-5' helicase
     ACI7YQ_17690
DNA repair and recombination proteins [BR:amab03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ACI7YQ_17690
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: XLP06939
LinkDB
Position
complement(4081911..4084517)
AA seq 868 aa
MTPLPSVFARWFEQKGWQLRDYQHTMLVEKDQHDCTLLIAPTGAGKTLSGFLPSLVELAE
TFGMSELAEMIEDEAPIETSETRQFSRLSETDELVETKATDRQAKKGKEKGGFNGLHTLY
ISPLKALTQDIHRNLLQPIEEMALPITAETRTGDTPSHKRQRQRKKPPNILLTTPESLML
MLSYADADKLFGKLKRVIIDETHSLMANKRGDFLSLALARLSVLSPNCKRIGLSATVAFP
ETLGAWLAGSDSVANIIKVKAGEKPKVEMLHSKARMPFGGFMARYAIDDIYQAIESAKTT
LVFVNTRAQSELLFQMLWEANKAALPIALYHGSLSKEQRRKTEAMMASGMLRAIVCTSAL
ELGIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLDEPSEALLVPANRFEALECQAAITA
IEKGELDGESPQPGALDIIPQFILNCLCSQAASPDTLYQEILTATPYQGLDRDDFDKLWQ
FTQDGGSALNAYERYQRLTRNDDGTFSPANRRVIQRHRQNIGTIVEAGRLKVKRIRRGNQ
GKIIGEVEEYFAQQLTPGDTFYFGGEVLRFEAIRDMQLHAKPAKAKEPKIPSYAGGQMPL
STYLAEGVRAILANQNSWKALPVQVQEWLNLQQAFSELPSPERVLVEQFPFRQAHYTLYY
TFDGRKANQTLGMLLTRRMEKMGIKPLSFSVTDYGLSVASVNAITQSQLQQLFQPDILGD
ELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHASQKTMKQVTFSTDLIYDTLREHDRDHIL
LKVARADAERELLDLRRLANLLIRYVDSATLVNLEKPSPMAIPIVLDVRSEQVKGAGAQA
IIEQANLYAEAETMLDEVRALLSGASVE
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgaccccacttccttcagtctttgcccgttggtttgaacaaaaaggctggcaacttcgc
gattatcaacacaccatgctggtggagaaagaccagcatgactgtacattattgattgca
cccactggagcaggcaaaactctgtccggctttttacctagcctagtcgagcttgctgag
acatttggtatgagtgagcttgctgagatgatagaagacgaggcaccaattgagacctct
gaaacgagacagttttctaggttgagtgaaactgacgaactcgtcgaaacaaaggctaca
gatagacaagcaaagaaaggaaaagaaaagggtggtttcaacggcctacataccctttac
atctcgccgctaaaagcgctcacgcaagatatccaccgtaatttgttgcagcccattgaa
gaaatggcgctgccgataacggccgagacacgcactggcgatacgccctcgcacaagcgc
cagcgccagcgtaaaaagcctccaaacatactgcttaccacaccagaatcgctcatgttg
atgttgagctacgccgatgccgataagctttttggcaagctaaagcgtgtcatcatcgac
gaaacgcatagtttaatggccaataaacgcggcgattttttatcacttgctctcgcacgg
ttaagcgtgctttctccaaactgcaagcgcattgggctgtctgccactgtagcatttccc
gagacgttgggcgcttggctggctggcagcgacagtgtagctaatattataaaagtgaaa
gcgggtgaaaaacctaaagttgaaatgttgcactctaaagcgcgcatgccttttggtggc
tttatggctcgctacgctatcgacgatatctatcaagcgattgagagtgctaagactacg
ctggtttttgtaaacacccgtgctcaatcagagctgttgtttcaaatgttgtgggaggca
aataaggctgcgctacccattgcactgtatcacggtagtttgagtaaagagcagcgccgg
aaaaccgaagccatgatggcaagcggcatgctgcgggctattgtatgtacgtcggcgctt
gaactcggtattgactggggcgacgtagacaaagtcattcaagtcggcgcacctaaaggc
gtaagcaggctgctgcaaaggatagggcgagcgaatcacaggttagatgagccgagtgaa
gcgttacttgtacctgcaaatcgttttgaggcactggaatgccaggcggcgatcaccgct
attgaaaaaggagagctagacggcgaaagcccacagccaggcgcgttagatattattccc
cagtttatcttgaactgtttgtgcagccaggctgctagccctgatactttatatcaagag
attctcactgctacgccttatcaagggctagatagagatgatttcgataaactgtggcag
tttacccaggacggcggtagcgcattaaacgcgtatgagcgttaccagcgcctgacaaga
aacgacgatggcactttttcgccagctaatcggcgtgttattcaaaggcacagacaaaat
atcggcacaatcgttgaagcggggcggcttaaagtaaagcgaatccgtcgaggaaatcaa
ggcaagattatcggagaggtggaagagtatttcgctcaacaattaacaccgggagatacc
ttctattttggaggagaggtgctgcgctttgaagctattcgcgatatgcagcttcacgcc
aaaccagcaaaagccaaagagcctaaaattccaagctacgcaggtgggcaaatgccgctg
tctacctatttagcggaaggtgttcgcgctatcttggccaatcaaaactcatggaaagca
ttacctgtgcaggtacaagagtggcttaaccttcagcaggccttttctgagttacctagt
cctgagcgggttctggtggagcaatttccattcaggcaagcgcactataccttgtactac
accttcgatggacgaaaggcaaatcaaactctaggtatgttgttaactcggcgaatggag
aaaatgggtatcaagcctttgagctttagcgtgaccgactatggattatcggtagcatcg
gtaaacgccatcacgcaaagtcagcttcagcagctatttcagccggatatattaggggac
gagctagaagattggatgttacaggcgcctatgcttaagcgctcgtttagacaagtggcg
gtggtgagcgggctgactgaacagcgttatcacgctagtcaaaaaaccatgaagcaggtt
acgttctcaactgatcttatttacgatacattgcgtgaacacgaccgcgatcatatttta
ctcaaagtagcccgggctgatgctgagcgagagttactcgacttgcgacgactggccaat
ttacttattcgctacgtagattcagcaacactggtgaaccttgaaaaaccatcgcccatg
gccattcctatagtacttgatgtgcgtagtgaacaagtaaaaggcgctggtgcgcaagcc
attattgagcaagctaatttatacgccgaagccgaaaccatgttagacgaagttcgcgcg
ttgctttcaggggctagcgttgaatag

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