Alteromonas macleodii ATCC 27126: MASE_00080
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Entry
MASE_00080 CDS
T02246
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amac
Alteromonas macleodii ATCC 27126
Pathway
amac03030
DNA replication
amac03410
Base excision repair
amac03420
Nucleotide excision repair
amac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MASE_00080
03410 Base excision repair
MASE_00080
03420 Nucleotide excision repair
MASE_00080
03440 Homologous recombination
MASE_00080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amac03032
]
MASE_00080
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_00080
Enzymes [BR:
amac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MASE_00080
DNA replication proteins [BR:
amac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MASE_00080
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MASE_00080
NER (nucleotide excision repair)
GGR (global genome repair) factors
MASE_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WH_GTF3C1_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFS35593
LinkDB
All DBs
Position
complement(17286..20078)
Genome browser
AA seq
930 aa
AA seq
DB search
MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV
IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVESGVEADDVIGT
LAKHATEKGIDTLISTGDKDMAQLVNEHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYKNLDKIADLSFRGSKSMAAKMQEYE
EQARLSYTLATISIDLDLDYDVEALMPCQADNEQLRDLFAEYEFKRWHAEVSALIAGGDT
SGANANTNEEKSDSAEESEQSESVEIDKSKYETVLEEEHFNAWVAKLEKAELIAFDTETT
SLNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPAQLSREFVLDALKPILESDTVIKVGQ
HIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEEIAGK
GAKQLTFNQISLEEAGPYAAEDADITLRLHNAIWTKLKEIPELKNLLIDVEVPLACVLSR
MEQEGVLIDSQRLRQQSQDLATRIAELESEVHEEAGEPFNLGSTKQLQHVLFEKMSLPII
KKTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNEEGRRVRQAFVPREGNKFVAADYSQIELRIMAHLSG
DKGLLDAFAHGKDIHKATAAEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLNI
PRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWIRKNASDDVTMMMQVHDELVFEIREDKVETYVS
TITALMESAATLNVPLVVEAGVGENWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattctaaaaagcctccatttattcttgtcgatggatcgtcatatctttttcgt
gcctttcacggtttaccaccattaaccaactcaaaaggccaagacaccggtgctatttat
ggtgttgtgaacatgcttaaaagcttgatcaaacaatacaacccgacgcatatggcggtg
atttttgatgctaaaggcaagacctttcgcgatgacatctataaagagtacaaagcgaac
cgtcctccgatgccggatgagctaagaagccaaatcgaaccgttgcacgccatcattaag
gcaatgggattacctgttattgttgaatcgggtgtagaagctgatgacgtgattggcacg
ttagccaaacacgccacagaaaaaggtattgatacccttatcagcaccggcgataaagac
atggcgcaactagtaaatgaacatgtcaccttaatcaacaccatgacaaaccaactgatg
gatgtcgaaggtgtaaatacgaagtttggtattccaccggagcttgtgatcgacttcctt
gcgcttaagggcgataaagtcgataacatcccaggtgtacctggtgtaggtgataaaagt
gctcaagccttgttaaacggtattggcggtatcgacgacatatataagaacctggataaa
attgcagatctgtcgtttagaggcagtaagtcgatggcggctaaaatgcaggaatacgaa
gagcaagctcggctttcttataccctagctactatcagcatcgatcttgaccttgactat
gatgtcgaagctcttatgccttgccaagccgataacgaacaacttcgcgatctgtttgcc
gaatacgagttcaaacgctggcatgcagaagtaagcgcgctaatagccggcggagatacc
tctggtgccaatgcaaacaccaacgaagaaaagagcgatagcgcagaagagagcgaacaa
agtgaatcggtagagatagataagtcgaagtatgagacagtgcttgaagaggaacacttt
aatgcgtgggtcgcgaagctagaaaaagccgagctaatcgcttttgataccgagacaacc
agccttaactacatggatgcggagttagttggtgtttcattttgtatagaggaaggtgaa
gcagcttatgtgcctgttgctcacgattacccagatgcacccgcccagctatcacgagaa
ttcgtattagacgcattaaaacctattttagaatcggacaccgtgatcaaagtaggtcaa
cacataaaatacgacaaaaacgtattagcgaactatgacattaccttaaacggcattggc
tttgacaccatgcttgagagctatgtactaaacagtaccgcgcagcgccatgatatggac
tcacttgccctagcctaccttggtcataaaactattcacttcgaagagattgcgggtaaa
ggcgcaaagcagctaacatttaatcaaattagccttgaagaagctgggccttatgccgca
gaagatgctgatatcacgcttcgcttacacaacgctatttggacgaagttgaaagaaatt
cctgagcttaaaaatctattgatagatgttgaggttcccctagcctgtgtactttctcgt
atggaacaggaaggtgtattgatagacagccaaaggctgcgtcagcaaagccaggatctt
gccacccggattgccgagcttgaaagtgaagtacatgaggaagctggcgagccattcaac
ttaggttctactaaacagcttcaacatgtcttgttcgaaaaaatgtcgctaccgatcata
aagaaaacgcctaaaggggcgccgtctacttctgaggacgtactgcaagaacttgcgctt
gagtacccgttgccgaagaagatcatggaataccgtggcctaaccaagctaaagaatacc
tacacggataaacttcctaagatgatcaatcatcgtacgggtcgagtgcatacttcttat
caccaagcagtaaccgccacgggacgactctcttctaccgatcctaacttacagaacatc
cctatccgaaatgaggaaggtcgccgcgtgcgtcaggcatttgtacccagagaaggaaat
aagttcgtcgcagccgactactcacaaattgagctgcgcattatggcgcacctttctggc
gataaaggtctgttagatgcctttgcgcatggtaaagatattcataaagcaaccgctgcg
gaagtttttggtgtgccacttgatgaagtaaccactgaacagcgtcgcagtgcaaaagcg
attaactttggcttaatttacggtatgagtgcctttgggttgtcgaagcaacttaatatt
ccacgtaatgaagcacaaaaatatatggatctttacttcgaacgctacccaggcgtgctt
gagtacatggattcaacacgtgagagcgcgaaagaaaaaggttatgtagaaaccgtattt
ggtcgcagactttatttgccagacattaaagctagtaatggagcacgtcgaaaaggcgca
gagcgcgcggcgattaatgcgcctatgcaaggcacggctgcggacatcattaagatggca
atgatcaaagttgatgactggatcaggaaaaatgcatctgatgatgtgaccatgatgatg
caggtacacgatgaattggtttttgagataagagaagacaaagtggaaacctatgtctct
actattactgctcttatggaaagcgcagctacgctaaatgttccgctggttgtcgaggca
ggtgtgggcgaaaactgggatgaagcgcactag
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