Alteromonas macleodii ATCC 27126: MASE_00725
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Entry
MASE_00725 CDS
T02246
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amac
Alteromonas macleodii ATCC 27126
Pathway
amac03420
Nucleotide excision repair
amac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MASE_00725
03430 Mismatch repair
MASE_00725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_00725
Enzymes [BR:
amac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MASE_00725
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MASE_00725
MMR (mismatch excision repair)
Other MMR factors
MASE_00725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AFS35716
LinkDB
All DBs
Position
complement(161994..164165)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEANLPENFQIIDSDDQY
RLIRRILKAMNLDEKHWAPRQIQWYINGNKDEGLRPQHIETHGDHIQKTMREVYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPEVLVHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGG
NNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNEPTTIRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDAQGELISVYAGFNELDEARFIVSKIKDWLNQGNALTDTAILYRNNAQ
SRVLEEALLHEGLAYRIYGGLRFFERQEIKDALGYMRMVSHPHDDAAFERVVNTPSRGIG
EKTLSQVRDTARMHNCSMWQACQLLINEGGFKGRALNAMQSFVLLITELEQSTLDEPLDQ
QADKAIRQSGLYAMYQAERGEKAQARLENLEELVTACKTFIVPEEAEEMSPLAAFLAHAS
LEAGETQADKDQDAVQMMTIHTAKGLEFPLVFLAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIREMPADCVEEVRLKSTISRPVHNRFS
QATSHASFEETGFSLGERVVHRKFGEGIVLNYEGSGEHGRVQVNFDEFGSKWLVLAYAKL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctcgactgctagacgagctaaacgacaaacagcgtgaagcagtagcagcc
ccactatctaacgccctagttttggctggcgcgggcagtggtaaaacccgcgtattagtg
catcgcattgcgtggttaatggaagttgaaaacatcgcccctttttctattttggcagtg
acctttaccaataaagcagccaaagaaatgcgcggccgaatagagtcgttgatgggtcgc
agcctgcacaatatgtggattggtaccttccacgggcttgcgcatcgcttactacgcgcg
caccatgcagaagccaacttgcctgagaattttcagataattgattcggacgatcagtat
cgacttattcgccgcattctgaaggccatgaacctggacgaaaagcattgggcgcctcgt
caaattcagtggtacataaatggcaacaaagacgaaggcttgcgccctcagcacattgaa
acccacggcgatcatattcaaaagaccatgcgcgaagtctatgcggcatatcaagacgct
tgcgaccgttcaggcttagtagattttgctgaactgttgctacgcgcacatgaattatgg
gctaaaaacccagaagtactagtccactatcaacgtcgtttccgtgcagtgttggtagac
gaattccaagataccaacaatatccaatatgcatggcttcgtatgctgtgtagtggtggt
aataataacattatgattgttggcgacgacgatcagtctatttacggctggcgcggcgcg
aacgtagataatattcagcacttcctgaaagacttcaacgagcctactactattcgcctt
gagcagaattaccgctctacaggaaacattcttaaagcggcgaacacggttatcgacaac
aatacgggccgtttagggaaagaactttggacagaagacgcgcaaggcgagcttatttct
gtatatgcgggtttcaacgagctagatgaagcgcgctttattgtttcgaaaatcaaagat
tggcttaatcaaggcaacgcccttactgataccgctattctttatcgaaacaacgcccag
tctcgagtactggaagaagccttgctacacgaagggctggcgtatcgcatatacggcggc
ctgcgcttcttcgagcgccaagaaattaaagacgcccttggctatatgcgcatggtaagc
cacccgcacgatgacgctgcttttgaacgcgtggttaacaccccaagtcgcggtattggt
gagaaaaccttatcgcaagtgcgcgacaccgcgcgaatgcacaactgttcaatgtggcag
gcgtgtcagttgctcattaatgaaggtggcttcaaaggccgcgcgctaaacgctatgcaa
agctttgtgttgctaattactgagctagagcaatccacgttagatgagccccttgaccaa
caagccgataaagctattcgccaatctggtctgtacgccatgtaccaagcagagcgcgga
gaaaaagcccaagcacgtctagaaaacttggaagaattggttactgcatgtaaaaccttt
atcgtgcctgaagaagccgaagaaatgtcgcctctggcagcctttctagctcatgcgtcg
ctggaagcaggtgaaacccaggcggataaagaccaggatgccgtgcaaatgatgaccatt
cacaccgctaaaggccttgaatttccactggtattcttagcaggtgtagaagaaggcatg
ttccctagccaaatgactaacgacgagccaggtcgaatggaagaggaacgcagactttgc
tatgttggtatgaccagagcaatgcaaaagttgtatattacttatgcagaaagtcgtcga
ctctatggccaagataagtatcatactgcttctcgatttattcgcgaaatgccagcagac
tgcgttgaagaggttaggctgaaatcgactatttcgcggcccgtgcacaaccgctttagc
caagcgacgtcgcacgcgagttttgaagaaacgggctttagtttaggtgagcgagttgta
caccgtaaatttggcgaagggatcgtacttaactacgaagggagtggtgagcacggtcga
gttcaagtaaacttcgacgaatttggcagcaaatggctggtacttgcttacgcaaagctg
gagaaagcgtaa
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