Alteromonas macleodii ATCC 27126: MASE_02560
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Entry
MASE_02560 CDS
T02246
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
amac
Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amac03021
]
MASE_02560
Transcription machinery [BR:
amac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MASE_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
AAA_34
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFS36072
LinkDB
All DBs
Position
complement(577113..579974)
Genome browser
AA seq
953 aa
AA seq
DB search
MSSNSQFSVGQRWLSNTEIELGLGVVIGSDFRSVEVLYPATGEARKYTKQDAPLTRLIFE
IGETVKSQDGWEMTITEKEESQDLFIYHGLREDTKAQARLPETMLDSHIRLNQPEKRLFS
QQLDNPKWFDLRERALDHQYDYLRSNTIGLAGARISLIPHQLHIASEVGGRHAPRVLLAD
EVGLGKTIEAALIIHQQLKTGRAERVLILVPDSLMHQWLVEMLRRVNLPFAIYDESRCEA
IEKSEGLQDDETSDASAVNPFENDQLVLCSIDFLSKSEKRQQQIQAAGWDLMVVDEAHHL
AWSSEAPSAEYLCVEALANQTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYDAFLDE
ESKYSQLADAVAPLLSDAEPNDKQRSKLAEFAPDVMEHAGDLSAPENRHALLHQLIDCHG
TGRMLFRNRRANIEGFPMRKLSAYELALPEVYSDAVSGGDLTYSLYPERMASVVNSWTKQ
DPRVEWLLDFMQSVKPEKILLICASARTAQELGEVIRTQTGIRHSVFHEGMSIVERDKAA
HYFADEEDGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIGRLDRIGQTQTVQ
IHVPYLAKTAQHVLLDWYHEGLNAFEKTCPTGSGVFDDVKPLLIGACLHPDDMSARDELV
NMSVTLNSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIITLDSEQDLSRFMGRVFDAIG
VQQDEKGNDCFILMPTESMVSQLPGLDPEGMTVTYKRRVATTLENVQFLSWDHPLVHTAM
DVVLTDVHGKSSMGFIAEPSLPKGAYWVEALFVLQAQAPKALQLGRFLPQTPVRVCLDAQ
GNPSELSFDVKRKIGRKISAQLLKALQQPLELAIEKARKLAHQQANQKQHDALNSMHSTL
NEEIQRLRDLQKRNPAVRDSEIEFIETQMNALDKVIQDADVQLDAIRIVVNNP
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaatagtcaattttcagttggtcagcgttggttaagcaacacagaaatagag
ctggggttaggtgtcgttattggtagcgacttccgttctgtcgaagtgttgtatccagca
acaggcgaagcgcgaaagtatactaagcaagatgcgccgcttacgcgactaatttttgaa
attggcgaaacggtcaaaagccaagacggctgggaaatgaccattactgaaaaagaagaa
agccaagatcttttcatctatcacgggcttcgcgaagacaccaaagcgcaagcgcgatta
cctgaaaccatgctagacagccacattcgcttgaaccaacctgaaaagcgcctgttcagt
cagcaattagacaaccctaaatggttcgatttgcgcgagcgtgctttagatcatcaatac
gattacttacgttcaaacaccattggtcttgcaggtgcgcgcatatcgcttattccgcac
caactccacattgcgtcagaggtaggcggcagacacgcacctcgcgtattacttgccgat
gaagtaggtcttggtaaaaccattgaagccgcgttaattattcaccagcagcttaaaaca
ggccgcgcagagcgcgtgcttattttggttccagactcgctcatgcaccaatggttagtt
gaaatgcttcgtcgcgttaaccttccttttgccatttacgatgaaagtcgttgcgaggct
atagagaagagcgaaggcttacaagatgacgaaacatctgacgcgagcgctgtgaatcca
tttgaaaacgaccagctagtactttgtagtatcgacttcctaagcaagagcgaaaaacgc
cagcagcaaattcaagctgcaggatgggatttaatggttgtcgatgaagcccatcacctt
gcgtggtcaagtgaggctccctctgccgaatacttgtgtgtggaagcgctggcaaaccaa
acgccaggcgtattactgcttaccgcaacgcctgatcaacttggtcacgaaagccacttt
gcccgcttgcgcctgctcgacccggctcgcttccatagctacgatgcattcttagatgaa
gaatcgaaatacagccaactggccgatgcggtagcgccattactttcagacgccgagcct
aacgacaaacaacgcagcaaactcgcagaattcgcgcctgacgtaatggaacatgcgggt
gatttaagtgcgccggaaaatcgccatgcgttgctgcaccaacttatcgattgtcacggc
acaggtcgtatgctgtttagaaaccgccgcgccaatatcgaaggctttccgatgcgtaaa
ttaagcgcttacgaactggctttgcctgaggtttattcagatgcagtgagcggcggcgac
ttaacctattcactgtatcctgaacgtatggcaagcgtggttaacagctggaccaagcaa
gacccgcgcgttgaatggctgcttgatttcatgcaaagcgttaagccagaaaagattctg
cttatttgcgcaagcgcccgtacagcgcaagagttaggtgaggttattcgcacgcaaacc
ggtattcgccacagtgtattccacgaaggcatgagcattgtggagcgcgacaaggcggcc
cattattttgctgatgaggaagacggcgcacaaattctactgtgtagtgaaattggtagc
gaaggtcgtaacttccagttcgctcatcatttggtgctgttcgatttgcctatcacgcca
gatctgcttgaacaacgtattggtcgtcttgaccgtattggccaaacccaaaccgtacaa
attcacgtgccgtatttagcgaaaaccgcgcagcacgtattactagattggtatcacgaa
gggctgaatgccttcgaaaagacctgccccacgggctctggtgtattcgacgacgttaag
cctctgcttattggtgcgtgcttacaccctgacgatatgagcgcgcgtgacgagctagtg
aacatgagtgttacgcttaatagccagctcgtagcgcagcttgaagccggtcgcgatcgt
ctcctagagcttaatgcttcgggagagggccgcgtagaacaactgcttgaagacattatc
acccttgatagcgaacaagatttgtcgcgctttatgggtcgcgtattcgatgctattggt
gttcagcaggacgaaaaaggcaatgactgctttattcttatgccaactgaatcgatggtg
agccagcttccaggtcttgacccagagggcatgacggttacttacaagcgccgtgttgcc
accacgctagaaaacgtgcagtttttaagttgggatcatccacttgtgcataccgccatg
gacgtagtactcaccgacgtgcacggaaagagcagcatgggctttattgccgagccgtct
ttgccaaaaggcgcttattgggttgaggcgttgtttgtgctgcaggcgcaagcgcctaaa
gcgcttcagttaggccgtttcttacctcaaacgcccgtgcgagtgtgtttagatgcgcaa
ggaaacccgtctgaattgagcttcgacgttaagcgtaaaattggacgtaagatctcggct
cagcttctaaaagccttgcaacagccgcttgagcttgccattgaaaaggcgcgtaagctt
gcccatcagcaagctaaccaaaagcaacacgacgcacttaacagcatgcacagcacgctt
aacgaagaaatacagcgcttgcgcgatcttcaaaagcgtaacccagcagtacgtgacagc
gaaattgagtttattgaaacgcaaatgaacgcccttgataaagttattcaggatgcagat
gttcagctggacgccattcgtattgtggtaaataacccgtaa
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