Alteromonas macleodii ATCC 27126: MASE_03795
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Entry
MASE_03795 CDS
T02246
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amac
Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_03795
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MASE_03795
Archaeal homologous recombinant proteins
MASE_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
nSTAND3
ABC_tran
Laminin_II
cobW
NTPase_1
T4bSS_IcmS
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFS36310
LinkDB
All DBs
Position
867531..871268
Genome browser
AA seq
1245 aa
AA seq
DB search
MRILTLRLKNLNALKGEWKIDFTHSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LGPISTSNNDIMTRGTAECLAEVEFDIKGKAYRAFWSMRRARGKVDGNLQSADVELAEVE
SGKVLATQVRPKSEEIEKLTGLNFARFTKSMMLSQGDFAAFLNANEADRAELLEELTGTE
IYGQISQAVHQQFSDAKQKKKEFAIKLEGVTLLSDEQITQLEEEQAQTKSQVATSNQTLV
QLQKQQQWQQAFNANELTIKEASEAQQSANNAINEARQELDLLTQSEPAEKLRLPFLQRN
GLQQDVTRYKEKLEEKAAQLPDLKTQKAQLSLEVTNAEQALVLTKQQSSELEKRINEQVV
PLDNQIAQLTTEQQKANENAARLRQSINALTLKRTEIENASADNKTKLGELETYLHEHHS
LSGIAEFISGWSETARHIEHDKKQLETLTQSVKNDRQALSSLDDAIAKTNESLSALTQIF
DDKNAQVAKCEKVLQATLSDKPSDTNSANTTSKANLQQERDNKLHHWDSVLQIGHIQQQY
LALEQDKVSLNAQKVDLAKQLAQQQSDRQALVDAYKQTRSNLKDIEALIALDAEVAHLRA
QLKSGEPCPVCGANEHTTSTVVIDVPETIQKRDSLKQQLDDIEQQGARAKESVTQTEFTL
AQVNKQLEQASGQRDTLLEKWQQISSVLSADIPSFEKVDINTSQSVAQFTQQFKTRLDDI
SAQLTRLEECEQALNAALQAKNEAQQALQGKQSELAVSLQQRETLEKQFNERNTELESKT
KRVNDGILALSETMTAHGADIHNLSIDGITTWLNEKAEALRTYKHNHQLHAKLKDELQGV
SSTLLVVNRDIESAENQLKGVCEELVQLDYSLKALLDSRSTVFPEGNIAETRNKASAAQE
HAERNVNECKSRLQQTDTILSRLEAEIAQLNEQMREKEQALSEATEHFSRQLASSPFADE
HAFSNALLDEDTRNTLLELQKRLTQQKQQADLKLENALATQQSLKAHANAALWQSELEEH
GAQWLDTKITQQAQQRDTLLSSLGQIEQQLSANNQARERQQQLVDEMAAFEAYYDDITYL
HSLIGSASGDKFRRFAQGLTLDNLVQLANQQLDKLHGRYQLIRKENEGLGLSVLDTWQGD
VVRDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDVALDALDN
LNASGKMIGVISHIEAMKERIPTQLKVIKRNGVGLSALEKPYAVG
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattgaccttacgccttaaaaacttaaacgccctaaaaggggagtggaagata
gatttcacccattcgccgtttatcgacaatggcctgtttgctatcacgggtccaacgggg
gcgggtaaaaccacgctacttgatgccatttgtttagcgctttatcaccaaacccctcgc
ttggggccaatttcaacgtctaacaacgacatcatgacccgcggcacggcggagtgtttg
gcggaggttgagtttgatattaagggaaaagcataccgtgcgttttggagtatgcgtcgg
gccagagggaaagttgacggtaacctgcaaagtgccgatgttgagctggccgaagttgaa
agcggcaaggtactggctacccaggttaggccgaaaagtgaagagattgaaaagctgact
ggccttaactttgcccgtttcaccaagtctatgatgttgtcgcaaggggattttgctgcg
tttttaaatgctaacgaggccgaccgagccgagctgcttgaagagttaactggcactgaa
atttacgggcagatatcacaggcagtacatcagcaatttagtgacgctaaacaaaagaaa
aaagagtttgcgataaagctggaaggcgtaactttgcttagcgacgagcaaatcacccag
cttgaagaagagcaagcacaaaccaagagccaagtcgcaacgtctaaccaaacacttgtt
cagttacaaaagcaacagcagtggcaacaagcgtttaacgccaatgagctaaccataaaa
gaagccagtgaagcgcagcagagcgcgaataacgccatcaatgaggcgagacaagaactt
gatcttttaacccaaagtgagccagctgaaaagcttcgcctgccatttttgcaaagaaac
gggcttcagcaagatgtaactcgttataaagaaaaacttgaagagaaagcagcccagttg
cccgacttaaaaacgcaaaaggcacagctcagtttggaagtgaccaacgctgaacaagca
ttagttcttacaaagcaacaaagcagtgagcttgaaaagcgcataaatgagcaggtagtt
ccactagataaccaaatagcgcagctcactactgaacagcaaaaagcaaacgaaaacgcg
gcacgtttaaggcagtcaataaacgcgttaacgctaaagcgcacagaaatcgaaaacgct
tcggcagataacaagaccaagcttggtgaactggaaacctacttacatgaacatcactca
cttagcggcatagcggaatttataagtggctggagtgaaacggcgcgccatattgaacat
gataaaaagcagttagaaacactaacacaaagcgtaaagaatgatcgtcaggcgctttca
tccctagatgacgctatcgcaaaaacaaatgagtcgttaagcgcgttaacgcagatcttc
gatgacaaaaacgcgcaagttgccaagtgcgaaaaggtacttcaggccacgctatctgac
aaaccaagtgatactaatagtgctaatacaaccagcaaagcaaaccttcagcaagagcgc
gataataagcttcatcattgggatagtgtgctacagatagggcatattcaacagcaatat
ttggcacttgagcaagacaaagtatcgctgaatgcacagaaagtcgacttagcgaagcaa
ctagcacagcagcaatctgaccgccaagccttggttgatgcttacaagcaaactcgtagt
aaccttaaagacatagaagcgcttatcgccctagatgctgaagtggcgcaccttcgcgca
cagttaaaaagtggcgagccatgccctgtctgtggggcaaacgagcacaccacgtctacc
gtggttattgatgtacctgaaactatccaaaagcgagatagcttaaagcagcagttagat
gatattgagcagcaaggggcgcgggcaaaagaaagtgttacacaaactgaattcacgctt
gctcaggttaataagcagctagaacaggcaagcgggcaacgagatacgctgctagaaaag
tggcagcagatttcaagcgtacttagcgctgatataccgagctttgaaaaggtcgacatt
aatacatcgcaaagcgtcgctcaatttacccagcagtttaaaactcgtcttgatgatatt
agtgctcaattaacccgtttagaagagtgcgagcaagctctaaatgctgcactgcaggct
aaaaatgaagcgcaacaggcattacaaggcaagcagtcagaacttgcagtttctctgcag
cagcgcgaaaccttggaaaagcaatttaacgaacgtaatacagagttagagagtaaaaca
aaaagggttaacgatggtattttagcgctcagcgagactatgacggcgcacggtgctgat
attcacaatctgtctattgatggaattaccacgtggttaaatgaaaaagccgaagcgcta
agaacttataaacacaatcatcagctacacgccaaacttaaagatgagttgcaaggggta
agtagcaccttgcttgtggttaatcgtgatatcgagagcgccgaaaatcagcttaagggt
gtatgcgaagagcttgtgcagctagattatagcctaaaggcgctgctagactcgcgctca
accgtattccctgaaggcaatattgctgaaaccagaaataaggcaagcgctgcccaagaa
cacgctgagcgaaatgtaaatgaatgcaaatctcgcctgcaacaaacggacactattttg
tctcgtttagaagcagaaattgcccagcttaatgagcaaatgcgcgaaaaagagcaggca
ctttcagaggcaacagagcactttagccgtcagttggcgagcagcccatttgccgatgag
cacgcgtttagcaatgcccttttagacgaagatacccgcaacaccttgcttgaactgcaa
aagcgattaactcagcaaaaacaacaagcggacttaaagctagaaaacgcgctagctacc
caacaatcgctaaaagcccatgctaacgcagcattgtggcagagcgagctagaagagcac
ggtgcacagtggctcgatacgaaaattacccagcaagctcagcagcgtgacacgctgtta
tcgtctttagggcaaattgaacagcagctaagcgctaacaatcaagcccgcgaaaggcag
cagcagcttgtggatgagatggctgcgtttgaggcctattacgatgatattacttacctg
cattcgttaattggttcggccagcggcgataaattcagacgttttgcccaaggacttacc
ttggacaacttagtgcagcttgcaaatcagcagcttgataaattacacggtcgctatcag
ctaattcgaaaagaaaacgaagggttgggtttaagtgtattggacacctggcaaggtgac
gtggtgcgagacaccaaaaccctgtccggcggagaaagtttcttagtgagccttgcactg
gcattagctttatctgacttggtcagtcacaagaccagtattgattcgctgtttttggat
gaaggctttggcaccctagatgctgaaactttggatgtggcgcttgatgccctagataac
ttaaatgccagcggaaaaatgattggtgtgataagccatattgaagccatgaaagagcgt
attcctactcagcttaaagtgattaaacgcaacggtgtaggcttaagcgcactagaaaaa
ccttatgcggtggggtga
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