KEGG   Alteromonas macleodii ATCC 27126: MASE_04050
Entry
MASE_04050        CDS       T02246                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
amac  Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:amac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amac03009]
    MASE_04050
Enzymes [BR:amac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MASE_04050
Ribosome biogenesis [BR:amac03009]
 Prokaryotic type
  rRNA helicases
   MASE_04050
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AFS36361
LinkDB
Position
complement(932644..933870)
AA seq 408 aa
MTFEELELDEALCHAAADMGFETPTSIQELVIPHALDGRDILASAPTGTGKTAAFLLPAC
QFLLDYPRRQPGATRILILTPTRELALQVYEQALAITKHTQIVCGVITGGINYGTDKETL
SKNLDILVATPGRLLEHIEKEAADCRDIECLILDEADRMLDMGFSTVVNQIAAEARWRKQ
NLLFSATLEGKGVKTFAHDILNNPEVIEANPSRKEKNKIHQWYHLADDMNHKQALLVNIL
KQETTTSAVVFVKTRERLQMLKDFLASKDIPVCWLQGEMPQDKRIAALARFKSGEVPILL
ATDVAARGIDVPNVSHVINFDMPRKADVYVHRIGRTGRAGAKGTAISLVEAHDFDMVAKT
ARYMGEPLKARVIDELRPKNKTPKIGPKKKKVKAKDKAKAKAKPKKKK
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgactttcgaagaactcgaattagacgaagcactgtgtcacgcagctgccgatatgggg
tttgaaactccaactagcattcaagaactggttatcccgcatgcgttggatggacgagat
atcttggcctctgctcctacaggtactggtaaaacagccgctttcttattgcctgcatgc
cagtttttacttgattatccgcgcagacagcctggtgctacacgtattttgatcctaacg
cctacccgcgagttagcgctacaggtttacgaacaagccctagccataacaaagcataca
caaattgtgtgcggggtaataaccggtggtattaactacggtaccgataaagaaacctta
agcaagaatctcgatattcttgtggccacgccaggtcgtttgcttgagcatatcgaaaaa
gaagccgcagattgccgtgatatcgagtgtttgatccttgatgaagctgaccgcatgttg
gatatgggtttctcaacggtagttaaccaaattgctgccgaagcgcgctggcgcaagcaa
aacctattgttctctgccacgcttgaaggcaaaggcgttaagactttcgctcatgacatt
ctcaacaatcctgaagtgattgaagcgaacccatcgcgtaaagagaagaacaaaattcat
cagtggtatcaccttgctgacgacatgaatcacaagcaagcattgctggtgaatattttg
aagcaagaaacaacgacgtcagcggttgtgtttgtgaaaacccgcgaacgcctgcaaatg
cttaaggacttcttagcctcgaaagatatcccagtgtgctggctacagggtgaaatgcca
caagacaaacgtattgcagcgctagcccgtttcaaaagtggtgaagtacctatcttgctg
gcaacggatgttgctgcccgcggtattgatgtgcctaacgtgagccatgttattaacttc
gacatgccgcgcaaagccgacgtttatgttcaccgcattggcagaaccggccgcgctggc
gccaaaggtactgctatatctttggttgaggcccacgattttgacatggtagccaaaacc
gcacgttacatgggcgaaccacttaaagctcgcgttattgacgagctacgccccaaaaac
aaaacgcctaaaattggcccgaaaaagaagaaagtgaaggccaaagacaaagccaaggca
aaagctaagcctaaaaagaaaaagtaa

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