Entry |
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Name |
(GenBank) ATP-dependent RNA helicase SrmB
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KO |
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Organism |
amac Alteromonas macleodii ATCC 27126
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Brite |
KEGG Orthology (KO) [BR:amac00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:amac03009]
MASE_04050
Enzymes [BR:amac01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MASE_04050
Ribosome biogenesis [BR:amac03009]
Prokaryotic type
rRNA helicases
MASE_04050
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(932644..933870)
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AA seq |
408 aa
MTFEELELDEALCHAAADMGFETPTSIQELVIPHALDGRDILASAPTGTGKTAAFLLPAC
QFLLDYPRRQPGATRILILTPTRELALQVYEQALAITKHTQIVCGVITGGINYGTDKETL
SKNLDILVATPGRLLEHIEKEAADCRDIECLILDEADRMLDMGFSTVVNQIAAEARWRKQ
NLLFSATLEGKGVKTFAHDILNNPEVIEANPSRKEKNKIHQWYHLADDMNHKQALLVNIL
KQETTTSAVVFVKTRERLQMLKDFLASKDIPVCWLQGEMPQDKRIAALARFKSGEVPILL
ATDVAARGIDVPNVSHVINFDMPRKADVYVHRIGRTGRAGAKGTAISLVEAHDFDMVAKT
ARYMGEPLKARVIDELRPKNKTPKIGPKKKKVKAKDKAKAKAKPKKKK |
NT seq |
1227 nt +upstreamnt +downstreamnt
atgactttcgaagaactcgaattagacgaagcactgtgtcacgcagctgccgatatgggg
tttgaaactccaactagcattcaagaactggttatcccgcatgcgttggatggacgagat
atcttggcctctgctcctacaggtactggtaaaacagccgctttcttattgcctgcatgc
cagtttttacttgattatccgcgcagacagcctggtgctacacgtattttgatcctaacg
cctacccgcgagttagcgctacaggtttacgaacaagccctagccataacaaagcataca
caaattgtgtgcggggtaataaccggtggtattaactacggtaccgataaagaaacctta
agcaagaatctcgatattcttgtggccacgccaggtcgtttgcttgagcatatcgaaaaa
gaagccgcagattgccgtgatatcgagtgtttgatccttgatgaagctgaccgcatgttg
gatatgggtttctcaacggtagttaaccaaattgctgccgaagcgcgctggcgcaagcaa
aacctattgttctctgccacgcttgaaggcaaaggcgttaagactttcgctcatgacatt
ctcaacaatcctgaagtgattgaagcgaacccatcgcgtaaagagaagaacaaaattcat
cagtggtatcaccttgctgacgacatgaatcacaagcaagcattgctggtgaatattttg
aagcaagaaacaacgacgtcagcggttgtgtttgtgaaaacccgcgaacgcctgcaaatg
cttaaggacttcttagcctcgaaagatatcccagtgtgctggctacagggtgaaatgcca
caagacaaacgtattgcagcgctagcccgtttcaaaagtggtgaagtacctatcttgctg
gcaacggatgttgctgcccgcggtattgatgtgcctaacgtgagccatgttattaacttc
gacatgccgcgcaaagccgacgtttatgttcaccgcattggcagaaccggccgcgctggc
gccaaaggtactgctatatctttggttgaggcccacgattttgacatggtagccaaaacc
gcacgttacatgggcgaaccacttaaagctcgcgttattgacgagctacgccccaaaaac
aaaacgcctaaaattggcccgaaaaagaagaaagtgaaggccaaagacaaagccaaggca
aaagctaagcctaaaaagaaaaagtaa |