Alteromonas macleodii ATCC 27126: MASE_07670
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Entry
MASE_07670 CDS
T02246
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
amac
Alteromonas macleodii ATCC 27126
Pathway
amac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MASE_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_07670
Enzymes [BR:
amac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
MASE_07670
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MASE_07670
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MASE_07670
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MASE_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFS37065
LinkDB
All DBs
Position
complement(1787527..1788957)
Genome browser
AA seq
476 aa
AA seq
DB search
MHAPTFLWHDFETFGTSPQKDLPCQFAAVRTDMDLNVIGKPINIMSAIANDYLPHPEACL
VTGITPQQTIRDGSNEADFAARIYQEMSTPNTCSVGFNSIRFDDEVSRYLFYRNFYDPYS
REWRNGNSRWDIIDLARACYALRPDGINWPRREDGAPSFKLEALTAANNIGHENAHDALS
DVYATIALAKLIKEKQPRLFDYALSLRSKQTVMQQIDLTKPSVLLHISSKLPASQGCCTW
VMPVAKHPTNNNAFIAIDLSHDIDSLVNDTPEEIRQALYAPSDTFDDALERPGLKLIHVN
RSPFITTAKAMTEDNAARLGLDRERCLDNYKVLASMPELATKIVDVYDDDIQSGELDIDH
ALYSGGFLNDEDRRWCERVIEAQPDDLATLSEKTQHEGLRKQLFRYRARNYPNTLTADEM
TRWQHHRQARLTDSAFHGSITLENYMMRLESLAHEHSDNPEKQAILRALYQYAENL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcacctacatttttgtggcacgattttgaaacctttggcaccagcccacaaaaa
gatctcccctgccaattcgctgcagtaagaactgatatggatttaaatgtgattggtaaa
cccataaatatcatgagcgccattgcgaatgattatttaccacatccagaagcgtgtttg
gtgaccggcataacaccgcagcaaaccattcgcgacggttctaacgaagctgacttcgcc
gcgcgaatttatcaggaaatgtcgacgccaaatacctgtagtgtgggctttaatagtatc
cgattcgacgatgaagtttcccgctacctgttttatagaaacttttacgacccatattca
cgtgaatggcgaaatggcaatagccgttgggatataatcgatttagcgcgagcgtgctat
gcgctgagacccgatggtattaattggccacgccgagaagatggtgcaccaagctttaaa
cttgaggcgttaactgcagctaataatattggccacgaaaacgctcacgatgctttgagt
gacgtctacgccacaatagcccttgctaaactgataaaagaaaagcagcctcgccttttc
gattatgcgctgtcgttacgcagtaaacaaacagttatgcagcaaattgatctcactaaa
ccatcggtattacttcatatctcgtctaaactccctgcctctcaaggctgttgcacttgg
gttatgcctgtggctaagcacccaaccaacaacaatgcatttatcgctattgatttatcg
catgacattgacagtttagtgaatgacacaccagaagagattagacaggcgctttatgcc
ccgtcagatacatttgacgatgcgttagaaagaccagggcttaagctcattcacgtcaac
cgctcgccatttattaccacagctaaagcaatgacagaagacaatgccgcacgactagga
ctggatcgcgagcgctgcttagacaattacaaagtacttgccagtatgcccgaactggcc
actaaaatcgtagatgtctatgatgacgacattcaaagtggtgaactggatatagatcac
gcgctatatagtggtgggtttcttaatgacgaagacagaaggtggtgtgagcgtgtaatt
gaagcacagcccgatgatttagccactctgagtgaaaaaacacagcacgaagggctcaga
aagcagctatttcgataccgcgctagaaattatcctaatacactgactgcagatgaaatg
accaggtggcagcatcatcgccaagctcgcttgactgattcagcttttcacggctcaatc
acattagaaaactatatgatgcggttggaatcactggcgcatgaacacagcgacaatcct
gagaagcaggccattttacgcgcactttaccaatatgccgaaaacctttga
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