Alteromonas macleodii ATCC 27126: MASE_08135
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Entry
MASE_08135 CDS
T02246
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amac
Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amac03016
]
MASE_08135
Enzymes [BR:
amac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MASE_08135
Transfer RNA biogenesis [BR:
amac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MASE_08135
Prokaryotic type
MASE_08135
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AFS37158
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All DBs
Position
1911493..1912467
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AA seq
324 aa
AA seq
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MARRRKGREINGIVLLDKPLGGSSNQLLQKVRWLYKAAKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAQLGVRTTTSDADGEVVEEKPVDVSEEQVRDACLAFLGKSKQ
IPSMFSALKHQGKPLYHYARQGIEIEREPRDIEVYELDVLRIELPFVEMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLDKLIEIQESLEEGDFKALDDLLIPM
DTAVSRLPFVTINDAERNRFDNGQSVKGTCSETLSEGMSYRVYHGDDTSGIFLGVGEGVL
DPKDQGIPKQEVFVNPKRRVVYPL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgtcgtaaaggccgtgagattaacggcatagtattgcttgataaaccgctt
ggtgggtcatctaaccaactgcttcaaaaagtgcgctggctgtacaaagctgcgaaggct
gggcatacaggcgcacttgatccacttgccagtggcatgttgccgctgtgcttgggtgaa
gctacgaagttttctcagtttcttctggatgcagaaaagacctacgaggtaactgctcaa
ctgggtgttcgcaccaccacgtctgatgccgatggcgaagtggttgaagaaaagcctgtt
gatgtaagcgaagaacaagtacgtgatgcgtgcttggcgtttctaggtaagagtaaacaa
atcccgtccatgttttcagcgcttaaacatcaaggtaagccactttatcactatgcacgt
caaggtatagagattgagcgtgaacctcgtgatattgaagtgtatgaattagatgtactg
cgtattgaactgccgtttgtagaaatgcgcattaaatgcagcaagggcacttatattcgc
tcaatcgtagatgatttaggtcagaaccttggctgtggcgcctacgtgactcgcttacac
cgtacggaagtagcagactatcctacggataaaatggtctcgctggataagttaattgaa
attcaggaatcactggaagaaggtgactttaaagcgctggatgacttattgattcctatg
gataccgccgtaagtcggttgccatttgtgaccattaacgacgctgaaagaaaccgtttt
gataacggccaatctgtaaaagggacttgtagcgaaacgctgagtgaaggcatgtcttac
cgcgtttaccatggcgacgataccagtggtattttcttaggcgtaggggaaggggttctt
gacccgaaagaccaaggtatccctaaacaagaagtgtttgttaacccaaaacgtcgagtt
gtttatccattgtag
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