Alteromonas macleodii ATCC 27126: MASE_08750
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Entry
MASE_08750 CDS
T02246
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amac
Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amac03032
]
MASE_08750
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_08750
Enzymes [BR:
amac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MASE_08750
DNA replication proteins [BR:
amac03032
]
Prokaryotic type
DNA Topoisomerases
MASE_08750
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MASE_08750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFS37281
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All DBs
Position
2056925..2057971
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AA seq
348 aa
AA seq
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MKRIKGYCNVYSDDSHLSIRRIACGDKRFYYRYASGKKVTGERVLKRIKKLVIPPNWRDT
FISRDSKASVQAVGYDEKGRKQYIYHNKWHEQQQVEKFERLVAFGNALPGFREHCLSLIS
QPTWTQERACALVCLLLDYTGARVGNAQYSKENNTYGLTTLRRKHVQAQCDDSVELAYIG
KHGKPRTLKVNDPELASLVCDCAQQQGYCLFRYQDKNKQWHDVTSEDVNAFIHNELSEQF
SCKDFRTWASSRFALTNLPSVYEQIANSRTKKWESTLSKCVAAELGNTPTVCRKYYIHPK
LFTVKNDEKACEKLINRVRSLHSEDCTQLTHLLPVEKLLLDVISSECA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggattaaaggctattgcaacgtctactctgatgatagccatctatcaataagg
cgcatcgcttgcggtgataaacggttttactatcgctatgcaagtggaaagaaagtcaca
ggagagcgcgtgctaaagcgtatcaaaaagcttgtcattcctccaaattggcgcgacacc
tttataagccgtgatagtaaagccagcgttcaagctgtcggctatgacgaaaaaggacgt
aaacaatatatctatcacaacaaatggcacgagcagcagcaagtagaaaaatttgagcgt
ttggttgcctttggtaatgcacttcctgggttccgtgagcactgtctttcattaatttca
cagccaacatggacgcaagaaagagcttgcgcgctggtgtgcctgttgctcgattacaca
ggtgctagagttggcaacgctcaatatagcaaggaaaataacacatatgggttaactaca
ttgcggcgcaagcatgtgcaagcgcagtgtgacgatagtgttgaacttgcttacattggt
aagcacggcaaaccaagaacactaaaagtaaacgaccctgagcttgcttcattagtttgt
gactgtgcgcaacaacaaggttactgtttatttcgttatcaagataagaataaacaatgg
cacgacgtaacgagcgaagacgttaatgcgttcatccacaacgaactaagtgaacagttc
agttgcaaagactttcgaacgtgggcatcaagtcgatttgcactaacaaacctgcccagt
gtttatgaacagatagcaaactccagaaccaagaaatgggagagtacgttaagtaagtgt
gttgcagcagaacttggcaatactcccaccgtttgcaggaaatattatattcatccgaaa
ctatttactgtgaaaaatgacgaaaaggcgtgtgagaagctaattaatcgggttcgctcg
ctacatagtgaagattgtacgcaacttacccatttactgcctgtagaaaagcttcttttg
gatgttatttcgtctgagtgcgcgtaa
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