Alteromonas macleodii ATCC 27126: MASE_10935
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Entry
MASE_10935 CDS
T02246
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amac
Alteromonas macleodii ATCC 27126
Pathway
amac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MASE_10935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_10935
Enzymes [BR:
amac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MASE_10935
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MASE_10935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
AAA_22
SLFN-g3_helicase
UvrD-helicase
UvrD_C
SH3_13
RecD_N
PhoH
DEAD
nSTAND3
AAA_16
ResIII
Flavi_DEAD
RPN13_C
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFS37710
LinkDB
All DBs
Position
complement(2553960..2556167)
Genome browser
AA seq
735 aa
AA seq
DB search
MKSNQHSVPSFFDNLFGIEAIDKFVAKEFGFIDELEQEEQFIWAGILAYLSYMQRNGHSC
IYLKDIAGTTLFKEVVAEQEAVLAAETNVHSNNGAVGASKSPVEQTEQEKAPKAGVDVPQ
LTPLLRIVKSALSNEQVAQLFVYSNGKLYSRRYYEFEQEVARNVVKRAALTPLSDEASEK
VKQLWPAIFPTETTDRQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQACDEN
LKIVLAAPTGKAQQRMTESIMNSIDGLRGKLDDAVLNNVPTDAVTLHRLLGLREHGVSTK
FNQHNQLAADVLIVDEASMVDLALMTRIVRALPDHARLYFIGDADQLPAVELGNVLEQLV
STEAASFDENANVPNGTNSLNSNDNAFSLGGVPSLMRQHIATLCPHLPLLPVDEQAKSYV
ATLQAPQRFKGQVAKVATAIQRGDASGALAAITDKASDNDETAGLNSNIDSTLVSKTASR
LQSGVHLWPEHQVSGRDLHQLAKESFLPIFDAGSAEEALNRLNVVRWLTPVRKGGMGVEG
LNNLVFDAIKHKIRKREGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSKGKLYAWFYQD
SQASGQNGSSQKASANAGDSADKTLAQKQALRSISLSRVPQFETVYAMTIHKSQGSEFNQ
VVLILPKPDSEKAANLFHRGLVYTGLTRAKDGCLIISDTATFSHMVQRVDKRYSGMSEAI
SLHLESTSNATPEIE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaatcaacactctgtaccgtcattttttgataacttgtttggcatcgaggcg
atcgacaaatttgtcgcaaaagaatttggctttattgatgaactggagcaagaagaacag
tttatttgggctgggatcttagcatacttgtcgtatatgcagcgcaatggccacagctgt
atctatctaaaagacatagcgggtacgacgctttttaaagaggtagtagcagaacaagaa
gcagtcttggcggccgaaacaaatgtgcatagcaataacggagcggttggggcatctaag
tcgccggtagaacaaaccgagcaggaaaaagcgcccaaagcaggtgttgacgtgccacaa
ctaacgccgttacttagaattgtaaaaagcgcgctgagtaacgagcaggtggctcaactg
tttgtctatagcaacggcaagctgtacagccgtcgctactatgaatttgaacaagaagta
gcacgaaatgttgtaaaacgagcggcgcttacgcccttaagtgatgaagctagcgaaaaa
gtaaagcaactttggccagcaatctttcctaccgaaacaaccgaccggcaagattggcag
caaatagcagtggcgaaaagcctaatgcagcgcttttgcgttataaacggtgggccagga
acaggtaaaacctatactgtattgcgcttattactggcgctacaggcttgcgatgaaaac
ttaaaaattgtgctggcagcgcctacaggtaaagcgcaacagcgtatgacggagtctatc
atgaacagcatagacggacttcgcggcaagttggacgacgcagtacttaacaacgtgcct
accgatgctgtgacgctacatagattactaggattgcgcgagcacggtgtatcgactaag
ttcaatcagcacaatcaattggcagcagatgtactcattgtcgatgaagcaagtatggtc
gacttagcgctaatgacgcgcatcgtacgagcgttaccagaccatgcgcgactctatttt
atcggtgatgccgatcagcttccagcagttgagcttggcaacgtgttagagcagctagtt
agtaccgaggcagcaagttttgacgaaaatgcgaatgtgccaaatggtacaaatagctta
aacagcaatgacaacgcgttttctttaggtggcgtgccatcgttaatgcgtcagcacatc
gctacgctgtgcccgcatttgcctctgttacctgttgatgagcaggcaaaaagctatgta
gcaactctgcaagcaccgcagcgcttcaaagggcaggtggcaaaagttgcaacggccata
cagcgaggtgatgcaagcggtgcacttgccgctattaccgacaaggctagtgacaatgat
gaaactgctggcctcaactcaaatatcgattcaactcttgtttcaaagactgcatcacgc
ctacaatctggcgttcacctatggccagagcaccaggttagcggccgtgatttacaccag
ttggccaaagaaagcttcctgcctatttttgatgctggcagtgccgaagaggcgcttaat
cgtctgaatgtggttaggtggctaaccccggtccgcaagggcggaatgggcgtagaaggc
ctgaataatttggtgttcgatgctatcaagcacaaaatcagaaagcgggaaggccatttc
tatcaaggtcagcccattatgattgtaaagaatcatcatcctcaacgactatcaaacggt
gaggttggtgtaatctggcctgacagcaaaggaaagctatatgcgtggttttaccaggat
agccaagcttcgggtcaaaacggttcaagtcagaaagcttcggcaaatgcgggagacagt
gctgacaagacgctagcgcaaaaacaagcgttgcgcagcatatcgctatcaagagtaccg
cagtttgaaactgtgtatgccatgaccatacataaatctcagggctctgagtttaaccaa
gttgtgcttattctacctaagcctgatagcgaaaaagccgccaatttatttcatcgaggc
ctagtatacacagggttaacccgtgctaaagacggctgcttaatcatctctgacaccgct
acatttagccacatggttcagcgggtggataagcgttattccgggatgtctgaagcgatt
agcctgcacctagagagcacatcaaacgccaccccagagattgaatag
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